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作为生态毒理学研究模式生物的斑马贻贝:用于代谢监测的全身提取物的¹H NMR谱解释

The Zebra Mussel () as a Model Organism for Ecotoxicological Studies: A Prior H NMR Spectrum Interpretation of a Whole Body Extract for Metabolism Monitoring.

作者信息

Prud'homme Sophie Martine, Hani Younes Mohamed Ismail, Cox Neil, Lippens Guy, Nuzillard Jean-Marc, Geffard Alain

机构信息

Stress Environnementaux et Biosurveillance des milieux aquatiques, Université Reims Champagne Ardenne, UMR-I 02 SEBIO, 51687 Reims, France.

LIEC Lab, Université de Lorraine, CNRS, F-57000 Metz, France.

出版信息

Metabolites. 2020 Jun 18;10(6):256. doi: 10.3390/metabo10060256.

DOI:10.3390/metabo10060256
PMID:32570933
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7345047/
Abstract

The zebra mussel () represents a useful reference organism for the ecotoxicological study of inland waters, especially for the characterization of the disturbances induced by human activities. A nuclear magnetic resonance (NMR)-based metabolomic approach was developed on this species. The investigation of its informative potential required the prior interpretation of a reference H NMR spectrum of a lipid-free zebra mussel extract. After the extraction of polar metabolites from a pool of whole-body powder, the resulting highly complex 1D H NMR spectrum was interpreted and annotated through the analysis of the corresponding 2D homonuclear and heteronuclear NMR spectra. The spectrum interpretation was completed and validated by means of sample spiking with 24 commercial compounds. Among the 238 detected H signals, 53% were assigned, resulting in the identification of 37 metabolites with certainty or high confidence, while 5 metabolites were only putatively identified. The description of such a reference spectrum and its annotation are expected to speed up future analyses and interpretations of NMR-based metabolomic studies on and to facilitate further explorations of the impact of environmental changes on its physiological state, more particularly in the context of large-scale ecological and ecotoxicological studies.

摘要

斑马贻贝()是内陆水域生态毒理学研究的一种有用的参考生物,特别是在表征人类活动引起的干扰方面。基于核磁共振(NMR)的代谢组学方法已在该物种上得以发展。对其信息潜力的研究需要事先解读无脂斑马贻贝提取物的参考氢核磁共振谱。从全身粉末池中提取极性代谢物后,通过分析相应的二维同核和异核核磁共振谱,对所得高度复杂的一维氢核磁共振谱进行了解读和注释。通过用24种商业化合物对样品进行加标,完成并验证了谱图解读。在检测到的238个氢信号中,53%得到了归属,从而确定或高度可信地鉴定出37种代谢物,而只有5种代谢物是推定鉴定的。这样一个参考谱图及其注释的描述有望加快未来对斑马贻贝基于核磁共振的代谢组学研究的分析和解读,并有助于进一步探索环境变化对其生理状态的影响,特别是在大规模生态和生态毒理学研究的背景下。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/b37602e8a755/metabolites-10-00256-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/0643011d4761/metabolites-10-00256-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/e5e0a80ccf5c/metabolites-10-00256-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/b37602e8a755/metabolites-10-00256-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/0643011d4761/metabolites-10-00256-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/e5e0a80ccf5c/metabolites-10-00256-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/312e/7345047/b37602e8a755/metabolites-10-00256-g003.jpg

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