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sp. nov.,分离自印度洋深海海水,并对属的描述进行了修正。

sp. nov., isolated from deep-sea water of the Indian Ocean, and emended description of the genus .

机构信息

Present address: Currently at China Agricultural University, Beijing 100193, PR China.

College of Life Sciences, Guangxi Normal University, Guilin 541004, PR China.

出版信息

Int J Syst Evol Microbiol. 2020 Aug;70(8):4523-4530. doi: 10.1099/ijsem.0.004307. Epub 2020 Jun 26.

Abstract

A novel Gram-stain-negative, aerobic, motile by peritrichous flagella, oval to rod-shaped bacterium, designated strain 2CG4, was isolated from a deep-sea water sample collected from the Northwest Indian Ocean. The results of phylogenetic analysis of both 16S rRNA gene and RpoC protein sequences indicated that this strain was affiliated with the genus in the clade of the family of the class , sharing 95.3 % similarity at the 16S rRNA gene sequence level with the type strain of YYQ-30, the only species in the genus . The predominant fatty acids (>10 %) of 2CG4 were summed feature 8 (Cω7 and/ or Cω6; 61.1 %) and -Cω8 (15.6 %). The polar lipids of 2CG4 were phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylglycerol, diphosphatidylglycerol, phosphatidylcholine and sulfoquinovosyldiacylglycerol. The only isoprenoid quinone of 2CG4 was ubiquinone-10. The DNA G+C content of 2CG4 was determined to be 69.4 %. The central gene for the photosynthetic reaction was not detected. No growth occurred for 2CG4 in the absence of NaCl. On the basis of these data, it is concluded that the 2CG4 represents a novel species of the genus , for which the name sp. nov. is proposed. The type strain is 2CG4 (=CGMCC 1.16468=JCM 32611).

摘要

一株新的革兰氏阴性、需氧、周身鞭毛、卵形到杆状的细菌,被命名为 2CG4 菌株,从西北印度洋深海水样中分离得到。16S rRNA 基因和 RpoC 蛋白序列的系统发育分析结果表明,该菌株属于 属,在 科的 分支中与 属的亲缘关系最近,与 属的模式种 YYQ-30 的 16S rRNA 基因序列相似性为 95.3%。2CG4 的主要脂肪酸(>10%)为 summed feature 8(Cω7 和/或 Cω6;61.1%)和 -Cω8(15.6%)。2CG4 的极性脂包括磷脂酰乙醇胺、磷脂甲基乙醇胺、磷脂酰甘油、双磷脂酰甘油、磷脂酰胆碱和磺基奎诺糖二酰甘油。2CG4 唯一的异戊二烯醌是泛醌-10。2CG4 的 DNA G+C 含量为 69.4%。未检测到光合作用反应的中心基因。2CG4 菌株在没有 NaCl 的情况下不能生长。基于这些数据,我们可以得出结论,2CG4 代表了一个新的 属种,因此提议使用新的属名 sp. nov.。其模式菌株为 2CG4(=CGMCC 1.16468=JCM 32611)。

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