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基于平均结构连接组的 fMRI 时间信号的图傅里叶变换在神经影像学分类中的应用。

Graph Fourier transform of fMRI temporal signals based on an averaged structural connectome for the classification of neuroimaging.

机构信息

IMT Atlantique - Lab STICC, Department of Electronics, Brest, France.

IMT Atlantique - Lab STICC, Department of Electronics, Brest, France.

出版信息

Artif Intell Med. 2020 Jun;106:101870. doi: 10.1016/j.artmed.2020.101870. Epub 2020 May 21.

DOI:10.1016/j.artmed.2020.101870
PMID:32593395
Abstract

Graph signal processing (GSP) is a framework that enables the generalization of signal processing to multivariate signals described on graphs. In this paper, we present an approach based on Graph Fourier Transform (GFT) and machine learning for the analysis of resting-state functional magnetic resonance imaging (rs-fMRI). For each subject, we use rs-fMRI time series to compute several descriptive statistics in regions of interest (ROI). Next, these measures are considered as signals on an averaged structural graph built using tractography of the white matter of the brain, defined using the same ROI. GFT of these signals is computed using the structural graph as a support, and the obtained feature vectors are subsequently benchmarked in a supervised learning setting. Further analysis suggests that GFT using structural connectivity as a graph and the standard deviation of fMRI time series as signals leads to more accurate supervised classification using a world-wide multi-site database known as ABIDE (Autism Brain Imaging Data Exchange) when compared to several other statistical metrics. Moreover, the proposed approach outperforms several approaches, based on using functional connectomes or complex functional network measures as features for classification.

摘要

图信号处理(Graph Signal Processing,简称 GSP)是一种将信号处理推广到图上描述的多元信号的框架。在本文中,我们提出了一种基于图傅里叶变换(Graph Fourier Transform,简称 GFT)和机器学习的方法,用于分析静息态功能磁共振成像(Resting-State Functional Magnetic Resonance Imaging,简称 rs-fMRI)。对于每个受试者,我们使用 rs-fMRI 时间序列在感兴趣区域(Region of Interest,简称 ROI)中计算几个描述性统计量。接下来,将这些度量值视为使用基于脑白质束追踪的平均结构图上的信号,该结构图使用相同的 ROI 定义。使用结构图作为支持来计算这些信号的 GFT,并在监督学习环境中对获得的特征向量进行基准测试。进一步的分析表明,与其他几种统计指标相比,使用结构连接作为图和 fMRI 时间序列的标准差作为信号的 GFT,在使用称为 ABIDE(Autism Brain Imaging Data Exchange)的全球多站点数据库进行监督分类时,可以获得更准确的结果。此外,与基于功能连接组或复杂功能网络度量作为分类特征的几种方法相比,所提出的方法表现更好。

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