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多维传感器与机器学习融合,实现高通量、无生物识别元件的细胞外囊泡生物标志物多维测定。

Converging Multidimensional Sensor and Machine Learning Toward High-Throughput and Biorecognition Element-Free Multidetermination of Extracellular Vesicle Biomarkers.

机构信息

Brazilian Nanotechnology National Laboratory, Brazilian Center for Research in Energy and Materials, Campinas, São Paulo 13083-970, Brazil.

Institute of Chemistry, University of Campinas, Campinas, São Paulo 13083-970, Brazil.

出版信息

ACS Sens. 2020 Jul 24;5(7):1864-1871. doi: 10.1021/acssensors.0c00599. Epub 2020 Jul 7.

Abstract

Extracellular vesicles (EVs) are a frontier class of circulating biomarkers for the diagnosis and prognosis of different diseases. These lipid structures afford various biomarkers such as the concentrations of the EVs () themselves and carried proteins (). However, simple, high-throughput, and accurate determination of these targets remains a key challenge. Herein, we address the simultaneous monitoring of and from a single impedance spectrum without using recognizing elements by combining a multidimensional sensor and machine learning models. This multidetermination is essential for diagnostic accuracy because of the heterogeneous composition of EVs and their molecular cargoes both within the tumor itself and among patients. Pencil HB cores acting as electric double-layer capacitors were integrated into a scalable microfluidic device, whereas supervised models provided accurate predictions, even from a small number of training samples. User-friendly measurements were performed with sample-to-answer data processing on a smartphone. This new platform further showed the highest throughput when compared with the techniques described in the literature to quantify EVs biomarkers. Our results shed light on a method with the ability to determine multiple EVs biomarkers in a simple and fast way, providing a promising platform to translate biofluid-based diagnostics into clinical workflows.

摘要

细胞外囊泡 (EVs) 是一类用于不同疾病诊断和预后的前沿循环生物标志物。这些脂质结构提供了各种生物标志物,如 EVs 本身的浓度 () 和携带的蛋白质 ()。然而,简单、高通量和准确地确定这些靶标仍然是一个关键挑战。在此,我们通过结合多维传感器和机器学习模型,在不使用识别元件的情况下,从单个阻抗谱中同时监测 和 。由于 EVs 及其分子货物在肿瘤内部和患者之间的异质性组成,这种多维测定对于诊断准确性至关重要。HB 铅笔核心充当双电层电容器,集成到可扩展的微流控设备中,而监督模型即使在少量训练样本的情况下也提供了准确的预测。用户友好的测量可以在智能手机上进行,从样品到答案的数据处理。与文献中描述的用于定量 EVs 生物标志物的技术相比,该新平台在吞吐量方面具有更高的优势。我们的结果揭示了一种能够简单快速地确定多种 EVs 生物标志物的方法,为将基于生物流体的诊断转化为临床工作流程提供了有前途的平台。

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