Molecular Parasitology Group, Molecular Enzyme Division, New England Biolabs, Inc., Ipswich, USA.
School of Animal and Comparative Biomedical Sciences, University of Arizona, Tucson, USA.
BMC Microbiol. 2020 Jun 30;20(1):188. doi: 10.1186/s12866-020-01863-y.
Wolbachia are the most widely spread endosymbiotic bacteria, present in a wide variety of insects and two families of nematodes. As of now, however, relatively little genomic data has been available. The Wolbachia symbiont can be parasitic, as described for many arthropod systems, an obligate mutualist, as in filarial nematodes or a combination of both in some organisms. They are currently classified into 16 monophyletic lineage groups ("supergroups"). Although the nature of these symbioses remains largely unknown, expanded Wolbachia genomic data will contribute to understanding their diverse symbiotic mechanisms and evolution.
This report focuses on Wolbachia infections in three pseudoscorpion species infected by two distinct groups of Wolbachia strains, based upon multi-locus phylogenies. Geogarypus minor harbours wGmin and Chthonius ischnocheles harbours wCisc, both closely related to supergroup H, while Atemnus politus harbours wApol, a member of a novel supergroup S along with Wolbachia from the pseudoscorpion Cordylochernes scorpioides (wCsco). Wolbachia supergroup S is most closely related to Wolbachia supergroups C and F. Using target enrichment by hybridization with Wolbachia-specific biotinylated probes to capture large fragments of Wolbachia DNA, we produced two draft genomes of wApol. Annotation of wApol highlights presence of a biotin operon, which is incomplete in many sequenced Wolbachia genomes.
The present study highlights at least two symbiont acquisition events among pseudoscorpion species. Phylogenomic analysis indicates that the Wolbachia from Atemnus politus (wApol), forms a separate supergroup ("S") with the Wolbachia from Cordylochernes scorpioides (wCsco). Interestingly, the biotin operon, present in wApol, appears to have been horizontally transferred multiple times along Wolbachia evolutionary history.
沃尔巴克氏体是分布最广泛的内共生菌,存在于多种昆虫和两类线虫中。然而,到目前为止,相对较少的基因组数据可用。沃尔巴克氏体共生体可以是寄生的,如许多节肢动物系统所描述的那样,也可以是专性共生体,如丝状线虫,或者在某些生物中两者兼而有之。它们目前被分为 16 个单系谱系群(“超级群”)。尽管这些共生关系的性质在很大程度上仍然未知,但扩展的沃尔巴克氏体基因组数据将有助于理解它们多样的共生机制和进化。
本报告重点介绍了基于多基因系统发育的三种伪蝎物种中两种不同沃尔巴克氏体菌株感染的情况。Geogarypus minor 携带 wGmin,Chthonius ischnocheles 携带 wCisc,两者都与超级群 H 密切相关,而 Atemnus politus 携带 wApol,这是一个与超级群 S 一起的新成员,还有来自伪蝎 Cordylochernes scorpioides(wCsco)的沃尔巴克氏体。超级群 S 与超级群 C 和 F 最为密切相关。通过与沃尔巴克氏体特异性生物素化探针杂交的目标富集来捕获沃尔巴克氏体 DNA 的大片段,我们产生了两个 wApol 的草图基因组。wApol 的注释突出了生物素操纵子的存在,而许多已测序的沃尔巴克氏体基因组中该操纵子是不完整的。
本研究至少强调了两种共生体在伪蝎物种中的获得事件。系统基因组分析表明,来自 Atemnus politus(wApol)的沃尔巴克氏体与来自 Cordylochernes scorpioides(wCsco)的沃尔巴克氏体形成了一个单独的超级群(“S”)。有趣的是,存在于 wApol 中的生物素操纵子似乎已经在沃尔巴克氏体进化史上多次横向转移。