Khdiar Mohammed Y, Barber Paul A, Hardy Giles E StJ, Shaw Chris, Steel Emma J, McMains Cameron, Burgess Treena I
Phytophthora Science and Management, Centre for Climate Impacted Terrestrial Ecosystems, Harry Butler Institute, Murdoch University, Murdoch 6150, Australia.
Biology Department, Education College, Iraqi University, Adhamiya, Baghdad 7366, Iraq.
Microorganisms. 2020 Jun 29;8(7):973. doi: 10.3390/microorganisms8070973.
Urban forests consist of various environments from intensely managed spaces to conservation areas and are often reservoirs of a diverse range of invasive pathogens due to their introduction through the nursery trade. Pathogens are likely to persist because the urban forest contains a mixture of native and exotic plant species, and the environmental conditions are often less than ideal for the trees. To test the impact of different land management approaches on the community, 236 discrete soil and root samples were collected from declining trees in 91 parks and nature reserves in Joondalup, Western Australia (WA). Sampling targeted an extensive variety of declining native trees and shrubs, from families known to be susceptible to . A sub-sample was set aside and DNA extracted for metabarcoding using -specific primers; the remaining soil and root sample was baited for the isolation of We considered the effect on the community of park class and area, soil family, and the change in canopy cover or health as determined through sequential measurements using remote sensing. Of the 236 samples, baiting techniques detected species from 24 samples (18 parks), while metabarcoding detected from 168 samples (64 parks). Overall, forty-four phylotypes were detected. Considering only sampling sites where was detected, species richness averaged 5.82 (range 1-21) for samples and 9.23 (range 2-24) for parks. was the most frequently found species followed by , and While park area and canopy cover had a significant effect on community the R values were very low, indicating they have had little effect in shaping the community. and the two most invasive species, often co-occurring (61% of samples); however, the communities with were more common than those with , reflecting observations over the past decade of the increasing importance of as a pathogen in the urban environment.
城市森林包含从高度管理区域到保护区的各种环境,由于通过苗木贸易引入,它们往往是多种入侵病原体的储存库。病原体很可能会持续存在,因为城市森林包含本地和外来植物物种的混合,而且环境条件对树木来说往往不太理想。为了测试不同土地管理方法对群落的影响,从西澳大利亚州(WA)乔敦卢普市91个公园和自然保护区中衰败的树木上采集了236个离散的土壤和根系样本。采样针对多种已知易受……影响的科的衰败本地树木和灌木。留出一个子样本并提取DNA,使用……特异性引物进行宏条形码分析;其余的土壤和根系样本用于诱饵分离……我们考虑了公园类别和面积、土壤类别以及通过遥感连续测量确定的树冠覆盖或健康状况变化对……群落的影响。在236个样本中,诱饵技术从24个样本(18个公园)中检测到……物种,而宏条形码分析从168个样本(64个公园)中检测到……总体而言,检测到44个……系统发育型。仅考虑检测到……的采样地点,样本的物种丰富度平均为5.82(范围为1 - 21),公园的物种丰富度平均为9.23(范围为2 - 24)。……是最常发现的物种,其次是……、……和……虽然公园面积和树冠覆盖对……群落有显著影响,但R值非常低,表明它们对塑造群落的影响很小。……和……这两种最具入侵性的物种经常同时出现(6l%的样本);然而,有……的群落比有……的群落更常见,这反映了过去十年中……作为城市环境中一种病原体重要性日益增加的观察结果。