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使用简易微流控流体动力学捕获装置进行外泌体的纯化与分析

Exosome Purification and Analysis Using a Facile Microfluidic Hydrodynamic Trapping Device.

作者信息

Tayebi Mahnoush, Zhou Yinning, Tripathi Pallavi, Chandramohanadas Rajesh, Ai Ye

机构信息

Pillar of Engineering Product Development, Singapore University of Technology and Design, 8 Somapah Road, Singapore 487372, Singapore.

出版信息

Anal Chem. 2020 Aug 4;92(15):10733-10742. doi: 10.1021/acs.analchem.0c02006. Epub 2020 Jul 17.

DOI:10.1021/acs.analchem.0c02006
PMID:32613828
Abstract

Exosomes are nanosized (30-150 nm) extracellular vesicles (EVs) secreted by various cell types. They are easily accessible in biological fluids and contain specific disease biomarkers, making them attractive for diagnosis and prognosis applications. Accurate biological characterization of exosomes is an important step toward clinical applications that require effective and precise isolation of subpopulations of exosomes. It is therefore of particular importance to develop an efficient and reliable exosome purification technique to isolate exosomes from the heterogeneous extracellular fluids. In this work, we intend to isolate and visualize exosomes by combining an affinity-based method and passive microfluidic particle trapping. Microbeads with a diameter of 20 μm are first functionalized with streptavidin and biotinylated antibodies and then used to immobilize and enrich exosomes on their surfaces using antigen-antibody affinity binding. We have developed a microfluidic device with trapping arrays to efficiently trap a large number of individual microbeads with enriched exosomes at the single-particle level, i.e., one single bead per trapping site, on the basis of a passive hydrodynamic trapping principle. The large-scale microfluidic single-bead trapping permits massively multiplexed fluorescence detection and quantification of the individual beads, which prevents the optical interfering of background noise as well as allowing one to acquire an average fluorescence density of a single bead for an accurate fluorescence-based exosome quantification. In addition, on-chip elusion and lysis of the protein and RNA content of captured exosomes enable further molecular analysis of exosomes, including Western blot and quantitative polymerase chain reaction. This microfluidic device provides a rapid and straightforward capturing and quantification method to analyze EVs for a variety of biological studies and applications.

摘要

外泌体是由多种细胞类型分泌的纳米级(30 - 150纳米)细胞外囊泡(EVs)。它们在生物体液中易于获取,并且含有特定的疾病生物标志物,这使得它们在诊断和预后应用方面具有吸引力。对外泌体进行准确的生物学表征是迈向临床应用的重要一步,临床应用需要有效且精确地分离外泌体亚群。因此,开发一种高效可靠的外泌体纯化技术以从异质细胞外液中分离外泌体尤为重要。在这项工作中,我们打算通过结合基于亲和力的方法和被动微流控粒子捕获来分离和可视化外泌体。首先用链霉亲和素和生物素化抗体对直径为20μm的微珠进行功能化,然后利用抗原 - 抗体亲和结合将外泌体固定并富集在其表面。我们基于被动流体动力捕获原理开发了一种带有捕获阵列的微流控装置,能够在单粒子水平上高效捕获大量带有富集外泌体的单个微珠,即每个捕获位点一个微珠。大规模的微流控单珠捕获允许对单个微珠进行大量多路复用荧光检测和定量,这既能防止背景噪声的光学干扰,又能获取单个微珠的平均荧光密度以进行基于荧光的外泌体准确定量。此外,对捕获的外泌体进行芯片上洗脱以及蛋白质和RNA含量的裂解,能够对外泌体进行进一步的分子分析,包括蛋白质印迹和定量聚合酶链反应。这种微流控装置为各种生物学研究和应用分析细胞外囊泡提供了一种快速直接的捕获和定量方法。

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