Institut für Zelluläre und Molekulare Botanik, Abt. Molekulare Evolution, University of Bonn, 53115 Bonn, Germany.
Molekulare Botanik, Universität Ulm, 89069 Ulm, Germany.
Plant Cell. 2020 Sep;32(9):2997-3018. doi: 10.1105/tpc.20.00311. Epub 2020 Jul 2.
Cytidine-to-uridine RNA editing is a posttranscriptional process in plant organelles, mediated by specific pentatricopeptide repeat (PPR) proteins. In angiosperms, hundreds of sites undergo RNA editing. By contrast, only 13 sites are edited in the moss () Some are conserved between the two species, like the mitochondrial editing site nad5eU598RC. The PPR proteins assigned to this editing site are known in both species: the DYW-type PPR protein PPR79 in and the E+-type PPR protein CWM1 in Arabidopsis (). CWM1 also edits sites ccmCeU463RC, ccmBeU428SL, and nad5eU609VV. Here, we reciprocally expressed the and Arabidopsis editing factors in the respective other genetic environment. Surprisingly, the editing factor edited all target sites when expressed in the Arabidopsis mutant background, even when carboxy-terminally truncated. Conversely, neither Arabidopsis CWM1 nor CWM1-PPR79 chimeras restored editing in plants. A CWM1-like PPR protein from the early diverging angiosperm macadamia () features a complete DYW domain and fully rescued editing of nad5eU598RC when expressed in We conclude that (1) the independently evolved editing factor PPR79 faithfully operates in the more complex Arabidopsis editing system, (2) truncated PPR79 recruits catalytic DYW domains in trans when expressed in Arabidopsis, and (3) the macadamia CWM1-like protein retains the capacity to work in the less complex editing environment.
胞嘧啶到尿嘧啶 RNA 编辑是植物细胞器中的一种转录后过程,由特定的五肽重复(PPR)蛋白介导。在被子植物中,有数百个位点发生 RNA 编辑。相比之下,在苔藓中只有 13 个位点被编辑。有些编辑位点在这两个物种中是保守的,例如线粒体编辑位点 nad5eU598RC。分配给这个编辑位点的 PPR 蛋白在这两个物种中都已知:在中是 DYW 型 PPR 蛋白 PPR79,在拟南芥中是 E+-型 PPR 蛋白 CWM1()。CWM1 还编辑位点 ccmCeU463RC、ccmBeU428SL 和 nad5eU609VV。在这里,我们在各自的遗传环境中相互表达了 和拟南芥的编辑因子。令人惊讶的是,当在拟南芥 突变体背景下表达时, 编辑因子编辑了所有的靶位点,即使截短了羧基末端。相反,拟南芥 CWM1 或 CWM1-PPR79 嵌合体都不能恢复 在 中的编辑。来自早期分化的被子植物澳洲坚果()的 CWM1 样 PPR 蛋白具有完整的 DYW 结构域,当在 中表达时,完全挽救了 nad5eU598RC 的编辑。我们得出结论:(1)独立进化的 编辑因子 PPR79在更复杂的拟南芥编辑系统中忠实运作,(2)截短的 PPR79 在拟南芥中表达时招募催化 DYW 结构域,(3)澳洲坚果 CWM1 样蛋白保留在较不复杂的 编辑环境中工作的能力。