Department of Biochemistry and Microbiology, Faculty of Science and Agriculture, University of Zululand, KwaDlangezwa 3886, South Africa.
Department of Molecular Microbiology and Genetics, University of Göttingen, 37077 Göttingen, Germany.
Int J Mol Sci. 2020 Jul 7;21(13):4814. doi: 10.3390/ijms21134814.
Unraveling the role of cytochrome P450 monooxygenases (CYPs/P450s), heme-thiolate proteins present in living and non-living entities, in secondary metabolite synthesis is gaining momentum. In this direction, in this study, we analyzed the genomes of 203 species for P450s and unraveled their association with secondary metabolism. Our analyses revealed the presence of 5460 P450s, grouped into 253 families and 698 subfamilies. The CYP107 family was found to be conserved and highly populated in and species, indicating its key role in the synthesis of secondary metabolites. species had a higher number of P450s than and cyanobacterial species. The average number of secondary metabolite biosynthetic gene clusters (BGCs) and the number of P450s located in BGCs were higher in species than in , mycobacterial, and cyanobacterial species, corroborating the superior capacity of species for generating diverse secondary metabolites. Functional analysis data mining confirmed that many P450s are involved in the biosynthesis of secondary metabolites. This study was the first of its kind to conduct a comparative analysis of P450s in such a large number (203) of species, revealing the P450s' association with secondary metabolite synthesis in species. Future studies should include the selection of species with a higher number of P450s and BGCs and explore the biotechnological value of secondary metabolites they produce.
解析细胞色素 P450 单加氧酶(CYPs/P450s)在次生代谢物合成中的作用,这些酶存在于生物和非生物实体中,正成为研究热点。在这方面,本研究分析了 203 个物种的基因组中 P450s 的存在情况,并揭示了它们与次生代谢物合成的关联。我们的分析揭示了 5460 种 P450s 的存在,它们分为 253 个家族和 698 个亚家族。CYP107 家族在 和 物种中被发现是保守且高度存在的,表明其在次生代谢物合成中的关键作用。 物种比 和蓝藻物种拥有更多的 P450s。 物种中次生代谢物生物合成基因簇(BGCs)的平均数量和位于 BGCs 中的 P450s 数量均高于 、分枝杆菌和蓝藻物种,这证实了 物种生成多种次生代谢物的卓越能力。功能分析和数据挖掘证实,许多 P450s 参与了次生代谢物的生物合成。本研究首次对如此大量(203 个) 物种中的 P450s 进行了比较分析,揭示了 P450s 与 物种次生代谢物合成的关联。未来的研究应包括选择具有更多 P450s 和 BGCs 的 物种,并探索它们产生的次生代谢物的生物技术价值。