Department of Biochemistry and Microbiology, Faculty of Science and Agriculture, University of Zululand, KwaDlangezwa 3886, South Africa.
College of Food Science and Technology, Huazhong Agricultural University, Wuhan 430070, China.
Int J Mol Sci. 2018 Nov 16;19(11):3623. doi: 10.3390/ijms19113623.
Cytochrome P450 monooxygenases (CYPs/P450s) are among the most catalytically-diverse enzymes, capable of performing enzymatic reactions with chemo-, regio-, and stereo-selectivity. Our understanding of P450s' role in secondary metabolite biosynthesis is becoming broader. Among bacteria, species are known to produce secondary metabolites, and recent studies have revealed the presence of secondary metabolite biosynthetic gene clusters (BGCs) in these species. However, a comprehensive comparative analysis of P450s and P450s involved in the synthesis of secondary metabolites in species has not been reported. This study intends to address these two research gaps. analysis of P450s in 128 species revealed the presence of 507 P450s that can be grouped into 13 P450 families and 28 subfamilies. No P450 family was found to be conserved in species. species were found to have lower numbers of P450s, P450 families and subfamilies, and a lower P450 diversity percentage compared to mycobacterial species. This study revealed that a large number of P450s (112 P450s) are part of different secondary metabolite BGCs, and also identified an association between a specific P450 family and secondary metabolite BGCs in species. This study opened new vistas for further characterization of secondary metabolite BGCs, especially P450s in species.
细胞色素 P450 单加氧酶(CYPs/P450s)是催化多样性最高的酶之一,能够具有化学、区域和立体选择性地进行酶促反应。我们对 P450s 在次生代谢物生物合成中的作用的理解正在变得更加广泛。在细菌中,已经知道有 种能够产生次生代谢物,最近的研究还揭示了这些物种中存在次生代谢物生物合成基因簇(BGCs)。然而,尚未有报道对 种物种中的 P450s 和参与次生代谢物合成的 P450s 进行全面的比较分析。本研究旨在解决这两个研究空白。对 128 种 物种中的 P450s 进行 分析,发现了 507 种 P450s,可以分为 13 个 P450 家族和 28 个亚家族。在 物种中没有发现保守的 P450 家族。与分枝杆菌物种相比, 物种的 P450s、P450 家族和亚家族数量较少,P450 多样性百分比也较低。本研究表明,大量的 P450s(112 种 P450s)是不同次生代谢物 BGCs 的一部分,并且还确定了特定的 P450 家族与 物种中次生代谢物 BGCs 之间的关联。本研究为进一步表征次生代谢物 BGCs,特别是 物种中的 P450s,开辟了新的前景。