Department of Biochemistry and Microbiology, Faculty of Science and Agriculture, University of Zululand, KwaDlangezwa 3886, South Africa.
Department of Molecular Microbiology and Genetics, University of Göttingen, Göttingen 37077, Germany.
Int J Mol Sci. 2020 Jan 19;21(2):656. doi: 10.3390/ijms21020656.
The prokaryotic phylum are some of the oldest known photosynthetic organisms responsible for the oxygenation of the earth. Cyanobacterial species have been recognised as a prosperous source of bioactive secondary metabolites with antibacterial, antiviral, antifungal and/or anticancer activities. Cytochrome P450 monooxygenases (CYPs/P450s) contribute to the production and diversity of various secondary metabolites. To better understand the metabolic potential of cyanobacterial species, we have carried out comprehensive analyses of P450s, predicted secondary metabolite biosynthetic gene clusters (BGCs), and P450s located in secondary metabolite BGCs. Analysis of the genomes of 114 cyanobacterial species identified 341 P450s in 88 species, belonging to 36 families and 79 subfamilies. In total, 770 secondary metabolite BGCs were found in 103 cyanobacterial species. Only 8% of P450s were found to be part of BGCs. Comparative analyses with other bacteria , and mycobacterial species have revealed a lower number of P450s and BGCs and a percentage of P450s forming part of BGCs in cyanobacterial species. A mathematical formula presented in this study revealed that cyanobacterial species have the highest gene-cluster diversity percentage compared to and mycobacterial species, indicating that these diverse gene clusters are destined to produce different types of secondary metabolites. The study provides fundamental knowledge of P450s and those associated with secondary metabolism in cyanobacterial species, which may illuminate their value for the pharmaceutical and cosmetics industries.
原核门是已知最早的负责地球氧气化的光合生物之一。蓝细菌物种已被认为是具有抗菌、抗病毒、抗真菌和/或抗癌活性的生物活性次生代谢物的丰富来源。细胞色素 P450 单加氧酶(CYPs/P450s)有助于各种次生代谢物的产生和多样性。为了更好地了解蓝细菌物种的代谢潜力,我们对 P450 进行了全面分析,预测了次生代谢物生物合成基因簇(BGCs),以及位于次生代谢物 BGCs 中的 P450。对 114 种蓝细菌物种的基因组分析在 88 种物种中鉴定出 341 种 P450,属于 36 个家族和 79 个亚家族。总共在 103 种蓝细菌物种中发现了 770 个次生代谢物 BGCs。只有 8%的 P450 被发现是 BGCs 的一部分。与其他细菌和分枝杆菌物种的比较分析表明,蓝细菌物种中的 P450 和 BGCs 数量较少,以及形成 BGCs 一部分的 P450 百分比较低。本研究提出的数学公式表明,与和分枝杆菌物种相比,蓝细菌物种具有最高的基因簇多样性百分比,表明这些多样化的基因簇注定会产生不同类型的次生代谢物。该研究提供了蓝细菌物种中 P450 及其与次生代谢相关的基本知识,这可能为制药和化妆品行业阐明它们的价值。