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人核黄素激酶:FMN 辅因子生物合成中的种属特异性特征。

Human riboflavin kinase: Species-specific traits in the biosynthesis of the FMN cofactor.

机构信息

Departamento de Bioquímica y Biología Molecular y Celular, Facultad de Ciencias, Universidad de Zaragoza, Zaragoza, Spain.

Instituto de Biocomputación y Física de Sistemas Complejos (GBsC-CSIC and BIFI-IQFR Joint Units), Universidad de Zaragoza, Zaragoza, Spain.

出版信息

FASEB J. 2020 Aug;34(8):10871-10886. doi: 10.1096/fj.202000566R. Epub 2020 Jul 10.

Abstract

Human riboflavin kinase (HsRFK) catalyzes vitamin B (riboflavin) phosphorylation to flavin mononucleotide (FMN), obligatory step in flavin cofactor synthesis. HsRFK expression is related to protection from oxidative stress, amyloid-β toxicity, and some malignant cancers progression. Its downregulation alters expression profiles of clock-controlled metabolic-genes and destroys flavins protection on stroke treatments, while its activity reduction links to protein-energy malnutrition and thyroid hormones decrease. We explored specific features of the mechanisms underlying the regulation of HsRFK activity, showing that both reaction products regulate it through competitive inhibition. Fast-kinetic studies show that despite HsRFK binds faster and preferably the reaction substrates, the complex holding both products is kinetically most stable. An intricate ligand binding landscape with all combinations of substrates/products competing with the catalytic complex and exhibiting moderate cooperativity is also presented. These data might contribute to better understanding the molecular bases of pathologies coursing with aberrant HsRFK availability, and envisage that interaction with its client-apoproteins might favor FMN release. Finally, HsRFK parameters differ from those of the so far evaluated bacterial counterparts, reinforcing the idea of species-specific mechanisms in RFK catalysis. These observations support HsRFK as potential therapeutic target because of its key functions, while also envisage bacterial RFK modules as potential antimicrobial targets.

摘要

人源核黄素激酶(HsRFK)催化维生素 B(核黄素)磷酸化为黄素单核苷酸(FMN),这是黄素辅因子合成的必要步骤。HsRFK 的表达与氧化应激、淀粉样β毒性和某些恶性癌症进展的保护有关。其下调会改变时钟控制代谢基因的表达谱,并破坏中风治疗中黄素的保护作用,而其活性降低则与蛋白质能量营养不良和甲状腺激素减少有关。我们探索了调节 HsRFK 活性的机制的具体特征,表明两种反应产物都通过竞争性抑制来调节它。快速动力学研究表明,尽管 HsRFK 更快地结合并且更偏好反应底物,但同时持有两种产物的复合物在动力学上是最稳定的。还呈现了一个复杂的配体结合景观,所有的底物/产物组合都与催化复合物竞争,并表现出中等的协同性。这些数据可能有助于更好地理解与异常 HsRFK 可用性相关的病理学的分子基础,并设想与它的客户-apoproteins 的相互作用可能有利于 FMN 的释放。最后,HsRFK 的参数与迄今为止评估的细菌对应物的参数不同,这强化了 RFK 催化中物种特异性机制的想法。这些观察结果支持 HsRFK 作为潜在的治疗靶点,因为它具有关键功能,同时也设想细菌 RFK 模块作为潜在的抗菌靶点。

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