Sachithanandam V, Saravanane N, Chandrasekar K, Karthick P, Lalitha P, Sai Elangovan S, Sudhakar M
Department of Ocean Studies and Marine Biology, Pondicherry University, Andaman Campus, Port Blair 744 112, India.
National Centre for Sustainable Coastal Management, Ministry of Environment, Forest & Climate Change, Chennai 600 025, India.
Saudi J Biol Sci. 2020 Aug;27(8):2065-2075. doi: 10.1016/j.sjbs.2020.06.011. Epub 2020 Jun 16.
The marine microbiome is a complex and least-understood habitat, which play a significant role in global biogeochemical cycles. The present study reported the culture-independent assessment of microbial diversity from the Arabian Sea (AS) sediments (from Gujarat to Malabar; at 30 m depth) by using metagenome sequence analysis. Our results elucidated that bacterial communities in the Malabar coastal region are highly diverse than the Gujarat coast. Moreover, Statistical analysis (Spearman rank correlation) showed a significant correlation co-efficient value (r = P < 0.001) between microbial communities and physicochemical parameters (salinity and dissolved oxygen) in the water column. A total of 39 bacterial phyla were recorded from the eastern side of AS, of which six phyla , and were found to be the most dominant group. The most dominant genus from Valapad region (Malabar Coast) was found to be sp., while other regions were dominated with . The subsequent Principal Coordinate Analysis (PCoA) showed 99.53% variance, which suggests that, highly distinct microbial communities at Valapad (Malabar Coast) sampling location than other sites. Moreover, the microbial metabolic activity analysis revealed the important functions of microbial communities in the AS are hydrocarbon degradation, polymer degradation, nutrient oxidation and sulphate reduction (biodegradation process). Further extended studies are needed to be carried out for better understanding the functional diversity of microbial communities from the marine sediments.
海洋微生物群落是一个复杂且最不为人所了解的栖息地,它在全球生物地球化学循环中发挥着重要作用。本研究报告了通过宏基因组序列分析对阿拉伯海(AS)沉积物(从古吉拉特到马拉巴尔;深度为30米)中微生物多样性进行的非培养评估。我们的结果表明,马拉巴尔沿海地区的细菌群落比古吉拉特海岸的更加多样化。此外,统计分析(斯皮尔曼等级相关性)显示,水柱中的微生物群落与理化参数(盐度和溶解氧)之间存在显著的相关系数值(r = P < 0.001)。从阿拉伯海东侧共记录到39个细菌门,其中6个门, 和 被发现是最主要的类群。发现瓦拉帕德地区(马拉巴尔海岸)最主要的属是 属,而其他地区则以 属为主。随后的主坐标分析(PCoA)显示方差为99.53%,这表明瓦拉帕德(马拉巴尔海岸)采样点的微生物群落与其他地点相比具有高度独特性。此外,微生物代谢活性分析揭示了阿拉伯海微生物群落的重要功能包括碳氢化合物降解、聚合物降解、营养物氧化和硫酸盐还原(生物降解过程)。需要进一步开展深入研究,以更好地了解海洋沉积物中微生物群落的功能多样性。