从一名重症肺炎患者痰液中分离出的铜绿假单胞菌XN-1的全基因组序列
Complete Genome Sequence of Pseudomonas aeruginosa XN-1, Isolated from the Sputum of a Severe Pneumonia Patient.
作者信息
Gao Chen, Wang Ying, Zhang Yi, Wei Jinning, Cheng Xin, Zhang Jin, Zou Quanming, Gu Jiang
机构信息
National Engineering Research Center of Immunological Products, Department of Microbiology and Biochemical Pharmacy, College of Pharmacy, Third Military Medical University, Chongqing, People's Republic of China.
Department of Respiratory, Hunan Children's Hospital, Hunan, People's Republic of China.
出版信息
Microbiol Resour Announc. 2020 Sep 3;9(36):e00653-20. doi: 10.1128/MRA.00653-20.
Abstract
is an important opportunistic pathogen with strong virulence and an invasive nature. Here, we report the complete genome of strain XN-1, which was isolated from the sputum of a severe pneumonia patient. The complete genome consists of one chromosome with 6,340,573 bp. Genome annotation predicts 5,974 coding sequences, 64 tRNAs, and 12 rRNAs.
摘要
是一种具有强毒力和侵袭性的重要机会致病菌。在此，我们报告从一名重症肺炎患者痰液中分离出的菌株XN-1的全基因组。全基因组由一条6,340,573 bp的染色体组成。基因组注释预测有5,974个编码序列、64个tRNA和12个rRNA。
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1
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Materials (Basel). 2019 Dec 7;12(24):4093. doi: 10.3390/ma12244093.
2
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J Med Microbiol. 2020 Jan;69(1):3-13. doi: 10.1099/jmm.0.001110.
3
Emerging therapies against infections with .针对……感染的新兴疗法
F1000Res. 2019 Aug 7;8. doi: 10.12688/f1000research.19509.1. eCollection 2019.
4
Rational Design of a Chimeric Derivative of PcrV as a Subunit Vaccine Against .Rational 设计的 PcrV 嵌合衍生物作为针对 的亚单位疫苗。
Front Immunol. 2019 Apr 24;10:781. doi: 10.3389/fimmu.2019.00781. eCollection 2019.
5
Antimicrobial Resistance in spp. and spp.耐甲氧西林金黄色葡萄球菌和耐万古霉素肠球菌的耐药性
Microbiol Spectr. 2018 Jun;6(3). doi: 10.1128/microbiolspec.ARBA-0007-2017.
6
Vaccination with a recombinant OprL fragment induces a Th17 response and confers serotype-independent protection against Pseudomonas aeruginosa infection in mice.用重组OprL片段进行疫苗接种可诱导Th17反应，并在小鼠中提供针对铜绿假单胞菌感染的血清型非依赖性保护。
Clin Immunol. 2017 Oct;183:354-363. doi: 10.1016/j.clim.2017.09.022. Epub 2017 Sep 29.
7
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Sci Rep. 2017 Jun 21;7(1):3957. doi: 10.1038/s41598-017-04029-5.
8
MISA-web: a web server for microsatellite prediction.MISA-web：一个用于微卫星预测的网络服务器。
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9
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10
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Database (Oxford). 2011 Mar 29;2011:bar009. doi: 10.1093/database/bar009. Print 2011.
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