莱茵衣藻CC-1690的高度连续纳米孔基因组组装
Highly Contiguous Nanopore Genome Assembly of Chlamydomonas reinhardtii CC-1690.
作者信息
O'Donnell Samuel, Chaux Frederic, Fischer Gilles
机构信息
Sorbonne Université, CNRS, Institut de Biologie Paris-Seine, Laboratory of Computational and Quantitative Biology, Paris, France
Sorbonne Université, CNRS, Institut de Biologie Paris-Seine, Laboratory of Computational and Quantitative Biology, Paris, France.
出版信息
Microbiol Resour Announc. 2020 Sep 10;9(37):e00726-20. doi: 10.1128/MRA.00726-20.
Abstract
The current reference genome remains fragmented due to gaps stemming from large repetitive regions. To overcome the vast majority of these gaps, publicly available Oxford Nanopore Technology data were used to create a new reference-quality genome assembly containing only 21 contigs, 30/34 telomeric ends, and a genome size of 111 Mb.
摘要
由于来自大型重复区域的缺口，当前的参考基因组仍然是碎片化的。为了克服绝大多数这些缺口，利用公开可用的牛津纳米孔技术数据创建了一个新的参考质量基因组组装体，该组装体仅包含21个重叠群、34个端粒末端中的30个，基因组大小为111 Mb。
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