Yu Haochen, Hu Ke, Zhang Tao, Ren Haoyu
Department of General, Visceral, and Transplant Surgery, Ludwig-Maximilians-University, Munich, Germany.
Department of Nephrology, The Second Affiliated Hospital of Chongqing Medical University, Chongqing, China (mainland).
Med Sci Monit. 2020 Sep 14;26:e926550. doi: 10.12659/MSM.926550.
BACKGROUND The anti-inflammatory drug sulfasalazine (SAS) has been confirmed to inhibit the growth of triple-negative breast cancer (TNBC), but the mechanism is not clear. The aim of this study was to use network pharmacology to find relevant pathways of SAS in TNBC patients. MATERIAL AND METHODS Through screening of the GeneCards, CTD, and ParmMapper databases, potential genes related to SAS and TNBC were identified. In addition, gene ontology and Kyoto Encyclopedia of Genes and Genomes analyses were performed using the R programming language. Protein-protein interaction networks were constructed using Cytoscape. The Kaplan-Meier plotter screened genes related to TNBC prognosis. TNBC patient gene expression profiles and clinical data were downloaded from The Cancer Genome Atlas database. A heatmap was generated using the R programming language that presents the expression of potential target genes in patients with TNBC. RESULTS Eighty potential target genes were identified through multiple databases. The bioinformatical analyses predicted the interrelationships, potential pathways, and molecular functions of the genes from multiple aspects, which are associated with physiological processes such as the inflammatory response, metabolism of reactive oxygen species (ROS), and regulation of proteins in the matrix metalloproteinase (MMP) family. Survival analysis showed that 12 genes were correlated with TNBC prognosis. Heatmapping showed that genes such as those encoding members of the MMP family were differentially expressed in TNBC tissues and normal tissues. CONCLUSIONS Our analysis revealed that the main reasons for the inhibitory effect of SAS on TNBC cells may be inhibition of the inflammatory response and MMP family members and activation of ROS.
背景 抗炎药物柳氮磺胺吡啶(SAS)已被证实可抑制三阴性乳腺癌(TNBC)的生长,但其机制尚不清楚。本研究旨在利用网络药理学寻找SAS在TNBC患者中的相关作用途径。
材料与方法 通过对GeneCards、CTD和ParmMapper数据库的筛选,确定了与SAS和TNBC相关的潜在基因。此外,使用R编程语言进行基因本体论和京都基因与基因组百科全书分析。使用Cytoscape构建蛋白质-蛋白质相互作用网络。Kaplan-Meier绘图仪筛选出与TNBC预后相关的基因。从癌症基因组图谱数据库下载TNBC患者的基因表达谱和临床数据。使用R编程语言生成热图,展示TNBC患者中潜在靶基因的表达情况。
结果 通过多个数据库共鉴定出80个潜在靶基因。生物信息学分析从多个方面预测了这些基因的相互关系、潜在途径和分子功能,这些与炎症反应、活性氧(ROS)代谢以及基质金属蛋白酶(MMP)家族中蛋白质的调节等生理过程相关。生存分析表明,有12个基因与TNBC预后相关。热图显示,MMP家族成员等基因在TNBC组织和正常组织中存在差异表达。
结论 我们的分析表明,SAS对TNBC细胞产生抑制作用的主要原因可能是抑制炎症反应和MMP家族成员以及激活ROS。