从保加利亚自制乳制品中分离的鼠李糖乳杆菌CBC-LR1菌株的基因组序列草图
Draft Genome Sequence of Lactobacillus rhamnosus Strain CBC-LR1, Isolated from Homemade Dairy Foods in Bulgaria.
作者信息
Shehata Hanan R, Chandler Richmond A, Newmaster Steven G
机构信息
NHP Research Alliance, College of Biological Sciences, University of Guelph, Guelph, Ontario, Canada
Department of Microbiology, Faculty of Pharmacy, Mansoura University, Mansoura, Egypt.
出版信息
Microbiol Resour Announc. 2020 Sep 17;9(38):e00961-20. doi: 10.1128/MRA.00961-20.
Abstract
Here, we report the draft genome sequence of strain CBC-LR1, which was isolated from naturally processed, homemade dairy foods in Bulgaria. The genome was assembled in 29 contigs with a total length of 2,892,155 bp and a GC content of 46.7%. Genome annotation predicted 2,638 coding genes and 49 tRNA genes.
摘要
在此，我们报告了菌株CBC-LR1的基因组序列草图，该菌株是从保加利亚天然加工的自制乳制品中分离出来的。基因组组装成29个重叠群，总长度为2,892,155 bp，GC含量为46.7%。基因组注释预测有2,638个编码基因和49个tRNA基因。
相似文献
1
Draft Genome Sequence of Lactobacillus rhamnosus Strain CBC-LR1, Isolated from Homemade Dairy Foods in Bulgaria.从保加利亚自制乳制品中分离的鼠李糖乳杆菌CBC-LR1菌株的基因组序列草图
Microbiol Resour Announc. 2020 Sep 17;9(38):e00961-20. doi: 10.1128/MRA.00961-20.
2
Draft Genome Sequence of Streptococcus thermophilus Strain CBC-S77, Isolated from Homemade Dairy Foods in Bulgaria.从保加利亚自制乳制品中分离出的嗜热链球菌CBC-S77菌株的基因组序列草图
Microbiol Resour Announc. 2020 Sep 10;9(37):e00879-20. doi: 10.1128/MRA.00879-20.
3
Draft Genome Sequences of Lactobacillus delbrueckii subsp. Strains CBC-LB69 and CBC-LB8, Isolated from Homemade Dairy Foods in Bulgaria.从保加利亚自制乳制品中分离出的德氏乳杆菌保加利亚亚种菌株CBC-LB69和CBC-LB8的基因组序列草图
Microbiol Resour Announc. 2020 Nov 5;9(45):e00876-20. doi: 10.1128/MRA.00876-20.
4
Draft Genome Sequence of Limosilactobacillus fermentum Strain NKN-51, Isolated from Fermented Yak Milk in the Western Himalayas of India.从印度西喜马拉雅地区发酵牦牛奶中分离出的发酵乳杆菌菌株NKN-51的基因组序列草图
Microbiol Resour Announc. 2021 Apr 22;10(16):e00186-21. doi: 10.1128/MRA.00186-21.
5
Draft genome sequence of Lactobacillus plantarum strain DMR17 isolated from homemade cow dahi of Sikkim Himalayan region: an evaluation of lactate fermentation and secondary metabolism.乳酸菌 DMR17 菌株的基因组草图序列，该菌株从锡金喜马拉雅地区的自制牛酸奶中分离得到：对乳酸发酵和次级代谢的评估。
Arch Microbiol. 2021 Jan;203(1):305-315. doi: 10.1007/s00203-020-02023-6. Epub 2020 Sep 14.
6
Draft Genome Sequence of Lactobacillus rhamnosus CLS17.鼠李糖乳杆菌CLS17的基因组序列草图
Genome Announc. 2015 May 14;3(3):e00478-15. doi: 10.1128/genomeA.00478-15.
7
Draft Genome Sequence of Alkalihalobacillus clausii Strain AXA-BCL3, Isolated from the Sahastradhara Springs of Uttarakhand, India.从印度北阿坎德邦萨哈斯特拉德拉温泉分离出的克劳氏碱嗜盐芽孢杆菌AXA-BCL3菌株的基因组序列草图
Microbiol Resour Announc. 2022 Dec 15;11(12):e0092622. doi: 10.1128/mra.00926-22. Epub 2022 Nov 3.
8
Draft Genome Sequence of Immunobiotic Strain IBL027, a Potential Adjuvant for Mucosal Vaccine Development.免疫益生菌株IBL027的基因组序列草图，一种用于黏膜疫苗开发的潜在佐剂
Genome Announc. 2017 Dec 14;5(50):e01268-17. doi: 10.1128/genomeA.01268-17.
9
Draft genome sequence dataset of PN39MY isolated from fermented vegetables.从发酵蔬菜中分离出的PN39MY的基因组序列数据集草案。
Data Brief. 2023 Jul 20;49:109436. doi: 10.1016/j.dib.2023.109436. eCollection 2023 Aug.
10
Draft Genome Sequence of Novel sp. Strain AJ-1, Isolated from a Leafcutter Ant in Uttarakhand, India.从印度北阿坎德邦的切叶蚁中分离出的新种菌株AJ-1的基因组序列草图
Microbiol Resour Announc. 2023 Jul 18;12(7):e0041323. doi: 10.1128/mra.00413-23. Epub 2023 Jun 20.
本文引用的文献
1
Probiotic Food as a Tool for Empowerment Across the Value Chain in Africa.益生菌食品作为非洲整个价值链赋能的工具。
Front Microbiol. 2018 Jul 10;9:1501. doi: 10.3389/fmicb.2018.01501. eCollection 2018.
2
ContEst16S: an algorithm that identifies contaminated prokaryotic genomes using 16S RNA gene sequences.ContEst16S：一种利用16S RNA基因序列识别受污染原核生物基因组的算法。
Int J Syst Evol Microbiol. 2017 Jun;67(6):2053-2057. doi: 10.1099/ijsem.0.001872. Epub 2017 Jun 22.
3
The development of probiotics for women's health.用于女性健康的益生菌的研发。
Can J Microbiol. 2017 Apr;63(4):269-277. doi: 10.1139/cjm-2016-0733. Epub 2016 Dec 20.
4
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
5
Antimicrobial activity against Shigella sonnei and probiotic properties of wild lactobacilli from fermented food.发酵食品中野生乳杆菌对宋内志贺菌的抗菌活性及益生菌特性。
Microbiol Res. 2011 Dec 20;167(1):27-31. doi: 10.1016/j.micres.2011.02.006. Epub 2011 Apr 3.
6
Orally administrated Lactobacillus gasseri TMC0356 and Lactobacillus GG alleviated nasal blockage of guinea pig with allergic rhinitis.口服加氏乳杆菌TMC0356和鼠李糖乳杆菌GG可缓解变应性鼻炎豚鼠的鼻塞。
Microbiol Immunol. 2007;51(11):1109-14. doi: 10.1111/j.1348-0421.2007.tb04006.x.
7
Anti-inflammatory effects of probiotic yogurt in inflammatory bowel disease patients.益生菌酸奶对炎症性肠病患者的抗炎作用。
Clin Exp Immunol. 2007 Sep;149(3):470-9. doi: 10.1111/j.1365-2249.2007.03434.x. Epub 2007 Jun 22.
8
Strong antimicrobial activity of Lactobacillus rhamnosus GG against Salmonella typhimurium is due to accumulation of lactic acid.鼠李糖乳杆菌GG对鼠伤寒沙门氏菌具有强大的抗菌活性，这归因于乳酸的积累。
FEMS Microbiol Lett. 2006 Jun;259(1):89-96. doi: 10.1111/j.1574-6968.2006.00250.x.
9
Effect of different probiotic preparations on anti-helicobacter pylori therapy-related side effects: a parallel group, triple blind, placebo-controlled study.不同益生菌制剂对幽门螺杆菌治疗相关副作用的影响：一项平行组、三盲、安慰剂对照研究。
Am J Gastroenterol. 2002 Nov;97(11):2744-9. doi: 10.1111/j.1572-0241.2002.07063.x.
10
Antimicrobial substance from a human Lactobacillus strain.来自一株人源乳酸杆菌的抗菌物质。
Antimicrob Agents Chemother. 1987 Aug;31(8):1231-3. doi: 10.1128/AAC.31.8.1231.
Zotero 插件