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南极嗜盐菌新种,从海洋沉积物中分离得到。

Arenibacter antarcticus sp. nov., isolated from marine sediment.

作者信息

Li An-Zhang, Lin Long-Zhen, Zhang Ming-Xia, Zhu Hong-Hui

机构信息

State Key Laboratory of Applied Microbiology Southern China, Guangdong Provincial Key Laboratory of Microbial Culture Collection and Application, Guangdong Microbial Culture Collection Center (GDMCC), Guangdong Institute of Microbiology, Guangzhou 510070, PR China.

出版信息

Int J Syst Evol Microbiol. 2017 Nov;67(11):4601-4605. doi: 10.1099/ijsem.0.002340. Epub 2017 Sep 25.

Abstract

A strictly aerobic, Gram-stain-negative, pale-golden, rod-shaped bacterium, designated as R18H21, was isolated from marine sediment collected from the Ross Sea, Antarctica. Strain R18H21 grew at 4-40 °C (optimum 25 °C), at pH 6.3-9.2 (optimum 7.5-8.5) and in 0.5-6 % (w/v) NaCl (optimum 2 %). Phylogenetic analyses based on 16S rRNA gene sequences showed that strain R18H21 belonged to the genus Arenibacter, with the highest similarity to two type strains, Arenibacter latericius KMM 426 (96.6 %) and Arenibacter certesii KMM 3941 (96.6 %), and lower similarities (95.2-95.9 %) to five other members of the genus Arenibacter. The major fatty acids were iso-C17 : 0 3-OH, Summed Feature 3 (C16 : 1ω6c and/or C16 : 1ω7c), iso-C15 : 0, iso-C15 : 1 G. The major polar lipids were phosphatidylethanolamine, an unidentified aminolipid and an unidentified phospholipid. The respiratory quinone of strain R18H21 was menaquinone-6. The DNA G+C content was 40.0 mol%. Based on phylogenetic, physiological and chemotaxonomic features, strain R18H21 has been classified as a novel species in the genus Arenibacter, for which the name Arenibacterantarcticus sp. nov. is proposed. The type strain of the novel species is R18H21 (=GDMCC 1.1159=KCTC 52924).

摘要

从南极洲罗斯海采集的海洋沉积物中分离出一株严格需氧、革兰氏染色阴性、浅金色、杆状的细菌,命名为R18H21。菌株R18H21在4-40 °C(最适温度25 °C)、pH 6.3-9.2(最适pH 7.5-8.5)和0.5-6%(w/v)NaCl(最适浓度2%)条件下生长。基于16S rRNA基因序列的系统发育分析表明,菌株R18H21属于嗜盐杆菌属,与两株模式菌株,即迟缓嗜盐杆菌KMM 426(相似度96.6%)和凯尔西嗜盐杆菌KMM 3941(相似度96.6%)最为相似,与嗜盐杆菌属的其他五个成员相似度较低(95.2-95.9%)。主要脂肪酸为异-C17 : 0 3-OH、特征性脂肪酸3(C16 : 1ω6c和/或C16 : 1ω7c)、异-C15 : 0、异-C15 : 1 G。主要极性脂为磷脂酰乙醇胺、一种未鉴定的氨基脂和一种未鉴定的磷脂。菌株R18H21的呼吸醌为甲基萘醌-6。DNA G+C含量为40.0 mol%。基于系统发育、生理和化学分类学特征,菌株R18H21被归类为嗜盐杆菌属的一个新物种,提议命名为南极嗜盐杆菌(Arenibacter antarcticus sp. nov.)。该新物种的模式菌株为R18H21(=GDMCC 1.1159=KCTC 52924)。

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