• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

DNA加合物组学分析的未来

The Future of DNA Adductomic Analysis.

作者信息

Villalta Peter W, Balbo Silvia

机构信息

Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, USA.

Division of Environmental Health Sciences, University of Minnesota, Minneapolis, MN 55455, USA.

出版信息

Int J Mol Sci. 2017 Aug 29;18(9):1870. doi: 10.3390/ijms18091870.

DOI:10.3390/ijms18091870
PMID:32962318
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC5618519/
Abstract

Covalent modification of DNA, resulting in the formation of DNA adducts, plays a central role in chemical carcinogenesis. Investigating these modifications is of fundamental importance in assessing the mutagenicity potential of specific exposures and understanding their mechanisms of action. Methods for assessing the covalent modification of DNA, which is one of the initiating steps for mutagenesis, include immunohistochemistry, P-postlabeling, and mass spectrometry-based techniques. However, a tool to comprehensively characterize the covalent modification of DNA, screening for all DNA adducts and gaining information on their chemical structures, was lacking until the recent development of "DNA adductomics". Advances in the field of mass spectrometry have allowed for the development of this methodology. In this perspective, we discuss the current state of the field, highlight the latest developments, and consider the path forward for DNA adductomics to become a standard method to investigate covalent modification of DNA. We specifically advocate for the need to take full advantage of this new era of mass spectrometry to acquire the highest quality and most reliable data possible, as we believe this is the only way for DNA adductomics to gain its place next to the other "-omics" methodologies as a powerful bioanalytical tool.

摘要

DNA的共价修饰会导致DNA加合物的形成,在化学致癌过程中起着核心作用。研究这些修饰对于评估特定暴露的诱变潜力及其作用机制至关重要。评估DNA共价修饰(诱变的起始步骤之一)的方法包括免疫组织化学、P-后标记法和基于质谱的技术。然而,在“DNA加合物组学”最近发展之前,一直缺乏一种能够全面表征DNA共价修饰、筛选所有DNA加合物并获取其化学结构信息的工具。质谱领域的进展使得这种方法得以发展。在这篇综述中,我们讨论了该领域的现状,突出了最新进展,并思考了DNA加合物组学成为研究DNA共价修饰的标准方法的未来发展方向。我们特别主张需要充分利用这个质谱新时代来获取尽可能高质量和最可靠的数据,因为我们相信这是DNA加合物组学能够与其他“组学”方法并列成为强大生物分析工具的唯一途径。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/dfd59f264284/ijms-18-01870-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/bd6150213157/ijms-18-01870-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/bdbaf7b6a2ab/ijms-18-01870-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/a2eece5ac745/ijms-18-01870-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/dfd59f264284/ijms-18-01870-g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/bd6150213157/ijms-18-01870-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/bdbaf7b6a2ab/ijms-18-01870-g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/a2eece5ac745/ijms-18-01870-g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1b06/5618519/dfd59f264284/ijms-18-01870-g004.jpg

相似文献

1
The Future of DNA Adductomic Analysis.DNA加合物组学分析的未来
Int J Mol Sci. 2017 Aug 29;18(9):1870. doi: 10.3390/ijms18091870.
2
Adductomics: a promising tool for the verification of chemical warfare agents' exposures in biological samples.加合物组学:一种有前途的工具,可用于验证生物样本中化学战剂的暴露情况。
Arch Toxicol. 2019 Jun;93(6):1473-1484. doi: 10.1007/s00204-019-02435-4. Epub 2019 Mar 28.
3
Emerging Technologies in Mass Spectrometry-Based DNA Adductomics.基于质谱的DNA加合物组学中的新兴技术。
High Throughput. 2019 May 14;8(2):13. doi: 10.3390/ht8020013.
4
Recent developments in DNA adduct analysis using liquid chromatography coupled with mass spectrometry.近年来液相色谱-质谱联用技术在 DNA 加合物分析中的应用进展。
J Sep Sci. 2020 Jan;43(1):31-55. doi: 10.1002/jssc.201900737. Epub 2019 Oct 15.
5
Novel approach to integrated DNA adductomics for the assessment of in vitro and in vivo environmental exposures.用于评估体外和体内环境暴露的综合 DNA 加合物组学的新方法。
Arch Toxicol. 2018 Aug;92(8):2665-2680. doi: 10.1007/s00204-018-2252-6. Epub 2018 Jun 25.
6
From single DNA adducts measurement to DNA adductomics in molecular epidemiology of cancer.从单个 DNA 加合物测量到癌症分子流行病学中的 DNA 加合物组学。
Postepy Biochem. 2024 May 23;70(1):52-56. doi: 10.18388/pb.2021_509.
7
DNA Adductomics: A Narrative Review of Its Development, Applications, and Future.DNA 加合物组学:发展、应用及未来的叙述性综述。
Biomolecules. 2024 Sep 19;14(9):1173. doi: 10.3390/biom14091173.
8
Targeted High Resolution LC/MS Adductomics Method for the Characterization of Endogenous DNA Damage.用于表征内源性DNA损伤的靶向高分辨率液相色谱/质谱加合物组学方法
Front Chem. 2019 Oct 24;7:658. doi: 10.3389/fchem.2019.00658. eCollection 2019.
9
Identification of New Markers of Alcohol-Derived DNA Damage in Humans.鉴定人类酒精相关 DNA 损伤的新型标志物。
Biomolecules. 2021 Feb 27;11(3):366. doi: 10.3390/biom11030366.
10
Development of an untargeted DNA adductomics method by ultra-high performance liquid chromatography coupled to high-resolution mass spectrometry.建立超高效液相色谱-高分辨质谱联用的非靶向 DNA 加合物组学方法。
Talanta. 2025 Jan 1;282:126985. doi: 10.1016/j.talanta.2024.126985. Epub 2024 Oct 5.

引用本文的文献

1
Investigating the origins of the mutational signatures in cancer.探究癌症中突变特征的起源。
Nucleic Acids Res. 2025 Jan 7;53(1). doi: 10.1093/nar/gkae1303.
2
DNA Adductomics: A Narrative Review of Its Development, Applications, and Future.DNA 加合物组学:发展、应用及未来的叙述性综述。
Biomolecules. 2024 Sep 19;14(9):1173. doi: 10.3390/biom14091173.
3
Multi-adductomics: Advancing mass spectrometry techniques for comprehensive exposome characterization.多加合物组学:推进用于全面暴露组表征的质谱技术。

本文引用的文献

1
DNA adduct profiling to mechanistically link red meat consumption to colon cancer promotion.DNA加合物分析,以从机制上关联红肉消费与结肠癌进展。
Toxicol Res (Camb). 2016 Jun 22;5(5):1346-1358. doi: 10.1039/c6tx00079g. eCollection 2016 Sep 1.
2
Ultrasensitive High-Resolution Mass Spectrometric Analysis of a DNA Adduct of the Carcinogen Benzo[a]pyrene in Human Lung.超敏高分辨质谱分析人类肺部致癌物苯并[a]芘的 DNA 加合物。
Anal Chem. 2017 Dec 5;89(23):12735-12742. doi: 10.1021/acs.analchem.7b02856. Epub 2017 Nov 17.
3
Data-Independent Mass Spectrometry Approach for Screening and Identification of DNA Adducts.
Trends Analyt Chem. 2024 Nov;180. doi: 10.1016/j.trac.2024.117900. Epub 2024 Aug 5.
4
Screening DNA Damage in the Rat Kidney and Liver by Untargeted DNA Adductomics.通过非靶向 DNA 加合物组学筛选大鼠肾脏和肝脏中的 DNA 损伤。
Chem Res Toxicol. 2024 Feb 19;37(2):340-360. doi: 10.1021/acs.chemrestox.3c00333. Epub 2024 Jan 9.
5
A Novel Adductomics Workflow Incorporating Software: Rapid Detection of Nucleic Acid Modifications for Studying the Exposome.一种新型的结合组学工作流程,包含软件:快速检测核酸修饰,用于研究外核组。
Environ Sci Technol. 2024 Jan 9;58(1):75-89. doi: 10.1021/acs.est.3c04674. Epub 2023 Dec 28.
6
A systems-level mass spectrometry-based technique for accurate and sensitive quantification of the RNA cap epitranscriptome.一种基于系统水平质谱的技术,可实现 RNA 帽转录组中外加修饰的 RNA 的准确和敏感定量。
Nat Protoc. 2023 Sep;18(9):2671-2698. doi: 10.1038/s41596-023-00857-0. Epub 2023 Aug 11.
7
Aldehyde-Associated Mutagenesis─Current State of Knowledge.醛类相关诱变——现有知识状况。
Chem Res Toxicol. 2023 Jul 17;36(7):983-1001. doi: 10.1021/acs.chemrestox.3c00045. Epub 2023 Jun 26.
8
DNA Adductomics for the Biological Effect Assessment of Contaminant Exposure in Marine Sediments.用于评估海洋沉积物中污染物暴露的生物效应的 DNA 加合物组学。
Environ Sci Technol. 2023 Jul 25;57(29):10591-10603. doi: 10.1021/acs.est.3c00499. Epub 2023 Jun 21.
9
Quantitation by Liquid Chromatography-Nanoelectrospray Ionization-High-Resolution Tandem Mass Spectrometry of Multiple DNA Adducts Related to Cigarette Smoking in Oral Cells in the Shanghai Cohort Study.采用液相色谱-纳升电喷雾电离-高分辨串联质谱法检测上海队列研究中口腔细胞中与吸烟有关的多种 DNA 加合物。
Chem Res Toxicol. 2023 Feb 20;36(2):305-312. doi: 10.1021/acs.chemrestox.2c00393. Epub 2023 Jan 31.
10
Nucleic acid adductomics - The next generation of adductomics towards assessing environmental health risks.核酸加合物组学 - 评估环境健康风险的下一代加合物组学。
Sci Total Environ. 2023 Jan 15;856(Pt 2):159192. doi: 10.1016/j.scitotenv.2022.159192. Epub 2022 Oct 1.
基于数据非依赖采集的质谱方法用于 DNA 加合物的筛选与鉴定
Anal Chem. 2017 Nov 7;89(21):11728-11736. doi: 10.1021/acs.analchem.7b03208. Epub 2017 Oct 18.
4
DNA Adduct Profiles Predict in Vitro Cell Viability after Treatment with the Experimental Anticancer Prodrug PR104A.DNA加合物谱可预测实验性抗癌前药PR104A处理后的体外细胞活力。
Chem Res Toxicol. 2017 Mar 20;30(3):830-839. doi: 10.1021/acs.chemrestox.6b00412. Epub 2017 Feb 19.
5
Screening for DNA adducts in ovarian follicles exposed to benzo[a]pyrene and cigarette smoke condensate using liquid chromatography-tandem mass spectrometry.采用液相色谱-串联质谱法检测苯并[a]芘和香烟烟雾冷凝物暴露的卵巢卵泡中的 DNA 加合物。
Sci Total Environ. 2017 Jan 1;575:742-749. doi: 10.1016/j.scitotenv.2016.09.122. Epub 2016 Sep 21.
6
A nontargeted screening method for covalent DNA adducts and DNA modification selectivity using liquid chromatography-tandem mass spectrometry.利用液相色谱-串联质谱技术进行非靶向性筛选共价 DNA 加合物和 DNA 修饰选择性的方法。
Talanta. 2016 Oct 1;159:93-102. doi: 10.1016/j.talanta.2016.05.074. Epub 2016 May 30.
7
MetDIA: Targeted Metabolite Extraction of Multiplexed MS/MS Spectra Generated by Data-Independent Acquisition.MetDIA:基于数据非依赖采集的多重 MS/MS 谱图靶向代谢物提取。
Anal Chem. 2016 Sep 6;88(17):8757-64. doi: 10.1021/acs.analchem.6b02122. Epub 2016 Aug 8.
8
Mass Spectrometric Mapping of the DNA Adductome as a Means to Study Genotoxin Exposure, Metabolism, and Effect.基于 DNA 加合物组学的质谱分析用于研究遗传毒物暴露、代谢和效应
Anal Chem. 2016 Aug 2;88(15):7436-46. doi: 10.1021/acs.analchem.6b00863. Epub 2016 Jul 14.
9
Linking DNA adduct formation and human cancer risk in chemical carcinogenesis.化学致癌作用中DNA加合物形成与人类癌症风险的关联
Environ Mol Mutagen. 2016 Aug;57(7):499-507. doi: 10.1002/em.22030. Epub 2016 Jun 27.
10
Diet-related DNA adduct formation in relation to carcinogenesis.与致癌作用相关的饮食诱导的DNA加合物形成
Nutr Rev. 2016 Aug;74(8):475-89. doi: 10.1093/nutrit/nuw017. Epub 2016 Jun 20.