• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

用于形状分析的变形函数深度学习。

Deep Learning of Warping Functions for Shape Analysis.

作者信息

Nunez Elvis, Joshi Shantanu H

机构信息

Department of Applied Mathematics and Statistics, Johns Hopkins University.

Ahmanson Lovelace Brain Mapping Center, Department of Neurology, UCLA.

出版信息

Conf Comput Vis Pattern Recognit Workshops. 2020 Jun;2020:3782-3790. doi: 10.1109/cvprw50498.2020.00441. Epub 2020 Jul 28.

DOI:10.1109/cvprw50498.2020.00441
PMID:32989409
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7520101/
Abstract

Rate-invariant or reparameterization-invariant matching between functions and shapes of curves, respectively, is an important problem in computer vision and medical imaging. Often, the computational cost of matching using approaches such as dynamic time warping or dynamic programming is prohibitive for large datasets. Here, we propose a deep neural-network-based approach for learning the warping functions from training data consisting of a large number of optimal matches, and use it to predict optimal diffeomorphic warping functions. Results show prediction performance on a synthetic dataset of bump functions and two-dimensional curves from the ETH-80 dataset as well as a significant reduction in computational cost.

摘要

函数与曲线形状之间的速率不变或重新参数化不变匹配分别是计算机视觉和医学成像中的一个重要问题。通常,使用动态时间规整或动态规划等方法进行匹配的计算成本对于大型数据集来说过高。在此,我们提出一种基于深度神经网络的方法,用于从由大量最优匹配组成的训练数据中学习变形函数,并使用它来预测最优的微分同胚变形函数。结果显示了在凹凸函数合成数据集和来自ETH - 80数据集的二维曲线数据集上的预测性能,以及计算成本的显著降低。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/30bd45d70cf2/nihms-1592616-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/70d808635c91/nihms-1592616-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/5b95424bf563/nihms-1592616-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/04bd380a5a9b/nihms-1592616-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/0de0ea670a6a/nihms-1592616-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/265f2d2c3073/nihms-1592616-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/9ab945c5bbfa/nihms-1592616-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/9fe80ef7af26/nihms-1592616-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/859e4cb2d5da/nihms-1592616-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/f349f67be007/nihms-1592616-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/30bd45d70cf2/nihms-1592616-f0010.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/70d808635c91/nihms-1592616-f0001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/5b95424bf563/nihms-1592616-f0002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/04bd380a5a9b/nihms-1592616-f0003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/0de0ea670a6a/nihms-1592616-f0004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/265f2d2c3073/nihms-1592616-f0005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/9ab945c5bbfa/nihms-1592616-f0006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/9fe80ef7af26/nihms-1592616-f0007.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/859e4cb2d5da/nihms-1592616-f0008.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/f349f67be007/nihms-1592616-f0009.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c07d/7520101/30bd45d70cf2/nihms-1592616-f0010.jpg

相似文献

1
Deep Learning of Warping Functions for Shape Analysis.用于形状分析的变形函数深度学习。
Conf Comput Vis Pattern Recognit Workshops. 2020 Jun;2020:3782-3790. doi: 10.1109/cvprw50498.2020.00441. Epub 2020 Jul 28.
2
Optimizing neural networks for medical data sets: A case study on neonatal apnea prediction.优化神经网络在医学数据集上的应用:以新生儿呼吸暂停预测为例的研究
Artif Intell Med. 2019 Jul;98:59-76. doi: 10.1016/j.artmed.2019.07.008. Epub 2019 Jul 25.
3
Degree-Pruning Dynamic Programming Approaches to Central Time Series Minimizing Dynamic Time Warping Distance.基于剪枝动态规划的中心时间序列最小化动态时间规整距离方法。
IEEE Trans Cybern. 2017 Jul;47(7):1719-1729. doi: 10.1109/TCYB.2016.2555578. Epub 2016 Jun 28.
4
Significance of Data Selection in Deep Learning for Reliable Binding Mode Prediction of Ligands in the Active Site of CYP3A4.数据选择在深度学习中对可靠预测CYP3A4活性位点配体结合模式的意义。
Chem Pharm Bull (Tokyo). 2019 Nov 1;67(11):1183-1190. doi: 10.1248/cpb.c19-00443. Epub 2019 Aug 17.
5
Compositionally-warped Gaussian processes.成分扭曲高斯过程。
Neural Netw. 2019 Oct;118:235-246. doi: 10.1016/j.neunet.2019.06.012. Epub 2019 Jul 4.
6
On the accuracy and computational cost of spiking neuron implementation.关于尖峰神经元实现的准确性和计算成本。
Neural Netw. 2020 Feb;122:196-217. doi: 10.1016/j.neunet.2019.09.026. Epub 2019 Oct 11.
7
Visualization of conserved structures by fusing highly variable datasets.通过融合高度可变的数据集来可视化保守结构。
Stud Health Technol Inform. 2002;85:494-500.
8
OCT-based deep learning algorithm for the evaluation of treatment indication with anti-vascular endothelial growth factor medications.基于光学相干断层扫描的深度学习算法用于评估抗血管内皮生长因子药物的治疗指征
Graefes Arch Clin Exp Ophthalmol. 2018 Jan;256(1):91-98. doi: 10.1007/s00417-017-3839-y. Epub 2017 Nov 10.
9
Prediction of Longitudinal Development of Infant Cortical Surface Shape Using a 4D Current-Based Learning Framework.使用基于电流的4D学习框架预测婴儿皮质表面形状的纵向发展
Inf Process Med Imaging. 2015;24:576-87. doi: 10.1007/978-3-319-19992-4_45.
10
A novel end-to-end classifier using domain transferred deep convolutional neural networks for biomedical images.一种使用域转移深度卷积神经网络的新型端到端生物医学图像分类器。
Comput Methods Programs Biomed. 2017 Mar;140:283-293. doi: 10.1016/j.cmpb.2016.12.019. Epub 2017 Jan 6.

引用本文的文献

1
Elastic Shape Analysis of Surfaces with Second-Order Sobolev Metrics: A Comprehensive Numerical Framework.具有二阶索伯列夫度量的曲面弹性形状分析:一个综合数值框架
Int J Comput Vis. 2023;131(5):1183-1209. doi: 10.1007/s11263-022-01743-0. Epub 2023 Jan 21.
2
Discussion of "LESA: Longitudinal Elastic Shape Analysis of Brain Subcortical Structures".《脑皮质下结构的纵向弹性形状分析(LESA)》的讨论
J Am Stat Assoc. 2023;118(541):22-24. doi: 10.1080/01621459.2022.2123334. Epub 2023 Apr 5.
3
SrvfNet: A Generative Network for Unsupervised Multiple Diffeomorphic Functional Alignment.SrvfNet:一种用于无监督多微分同胚功能对齐的生成网络。
Conf Comput Vis Pattern Recognit Workshops. 2021 Jun;2021:4476-4484. doi: 10.1109/cvprw53098.2021.00505. Epub 2021 Sep 1.
4
Global Diffeomorphic Phase Alignment of Time-Series from Resting-State fMRI Data.静息态功能磁共振成像数据时间序列的全局微分同胚相位对齐
Med Image Comput Comput Assist Interv. 2020 Oct;12267:518-527. doi: 10.1007/978-3-030-59728-3_51. Epub 2020 Sep 29.

本文引用的文献

1
Elastic Registration of Single Subject Task Based fMRI Signals.基于单受试者任务功能磁共振成像信号的弹性配准
Med Image Comput Comput Assist Interv. 2018 Sep;11072:154-162. doi: 10.1007/978-3-030-00931-1_18. Epub 2018 Sep 13.
2
A Generalizable, Data-Driven Approach to Predict Daily Risk of Clostridium difficile Infection at Two Large Academic Health Centers.一种可推广的数据驱动方法,用于预测两个大型学术医疗中心的艰难梭菌感染的每日风险。
Infect Control Hosp Epidemiol. 2018 Apr;39(4):425-433. doi: 10.1017/ice.2018.16.
3
Quicksilver: Fast predictive image registration - A deep learning approach.快银:快速预测图像配准 - 深度学习方法。
Neuroimage. 2017 Sep;158:378-396. doi: 10.1016/j.neuroimage.2017.07.008. Epub 2017 Jul 11.
4
Deep Canonical Time Warping for Simultaneous Alignment and Representation Learning of Sequences.深度正则时间 warp 用于序列的同时对齐和表示学习。
IEEE Trans Pattern Anal Mach Intell. 2018 May;40(5):1128-1138. doi: 10.1109/TPAMI.2017.2710047. Epub 2017 Jun 8.
5
Statistical shape analysis of the corpus callosum in Schizophrenia.精神分裂症胼胝体的统计形状分析。
Neuroimage. 2013 Jan 1;64:547-59. doi: 10.1016/j.neuroimage.2012.09.024. Epub 2012 Sep 18.
6
Diffeomorphic sulcal shape analysis on the cortex.脑回形态的可变形分析。
IEEE Trans Med Imaging. 2012 Jun;31(6):1195-212. doi: 10.1109/TMI.2012.2186975. Epub 2012 Feb 6.
7
Removing Shape-Preserving Transformations in Square-Root Elastic (SRE) Framework for Shape Analysis of Curves.在用于曲线形状分析的平方根弹性(SRE)框架中去除保形变换
Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2007;4679:387-398. doi: 10.1007/978-3-540-74198-5_30.
8
A Novel Representation for Riemannian Analysis of Elastic Curves in ℝ.实数空间中弹性曲线的黎曼分析的一种新表示法。
Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2007 Jul 16;2007(17-22 June 2007):1-7. doi: 10.1109/CVPR.2007.383185.
9
Shape Analysis of Elastic Curves in Euclidean Spaces.欧几里得空间中弹性曲线的形状分析。
IEEE Trans Pattern Anal Mach Intell. 2011 Jul;33(7):1415-28. doi: 10.1109/TPAMI.2010.184. Epub 2010 Oct 14.