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合成、机械和生物学探究(-)-银杏内酯的化学空间。

Synthetic, Mechanistic, and Biological Interrogation of Chemical Space En Route to (-)-Bilobalide.

机构信息

Department of Chemistry, Scripps Research, La Jolla, California 92037, United States.

Department of Chemistry and Biochemistry, University of California at Los Angeles, Los Angeles, California 90095, United States.

出版信息

J Am Chem Soc. 2020 Oct 28;142(43):18599-18618. doi: 10.1021/jacs.0c08231. Epub 2020 Oct 16.

Abstract

Here we interrogate the structurally dense (1.64 mcbits/Å) GABA receptor antagonist bilobalide, intermediates en route to its synthesis, and related mechanistic questions. C isotope labeling identifies an unexpected bromine migration en route to an α-selective, catalytic asymmetric Reformatsky reaction, ruling out an asymmetric allylation pathway. Experiment and computation converge on the driving forces behind two surprising observations. First, an oxetane acetal persists in concentrated mineral acid (1.5 M DCl in THF-/DO); its longevity is correlated to destabilizing steric clash between substituents upon ring-opening. Second, a regioselective oxidation of -hydroxybilobalide is found to rely on lactone acidification through lone-pair delocalization, which leads to extremely rapid intermolecular enolate equilibration. We also establish equivalent effects of (-)-bilobalide and the nonconvulsive sesquiterpene (-)-jiadifenolide on action potential-independent inhibitory currents at GABAergic synapses, using (+)-bilobalide as a negative control. The high information density of bilobalide distinguishes it from other scaffolds and may characterize natural product (NP) space more generally. Therefore, we also include a Python script to quickly (ca. 132 000 molecules/min) calculate information content (Böttcher scores), which may prove helpful to identify important features of NP space.

摘要

在这里,我们研究了结构密集的(1.64 mcbits/Å)GABA 受体拮抗剂白果内酯、其合成过程中的中间体以及相关的机制问题。C 同位素标记确定了在α选择性、催化不对称 Reformatsky 反应过程中出乎意料的溴迁移,排除了不对称烯丙基化途径。实验和计算结果都集中在两个令人惊讶的观察结果背后的驱动力上。首先,在浓矿物酸(1.5 M DCl 在 THF-/DO)中,氧杂环丁烷缩醛仍然存在;其稳定性与开环时取代基之间的不稳定空间位阻有关。其次,发现 -羟基白果内酯的区域选择性氧化依赖于内酯的酸化为通过孤对离域化,这导致非常快速的分子间烯醇化物平衡。我们还使用(+)-白果内酯作为阴性对照,证明白果内酯和非惊厥性倍半萜(-)-吉阿芬内酯对 GABA 能突触的动作电位非依赖性抑制电流具有等效作用。白果内酯的高信息密度使其有别于其他支架,并且可能更普遍地描述天然产物(NP)空间。因此,我们还包括一个 Python 脚本,用于快速(约 132000 分子/分钟)计算信息含量(Böttcher 分数),这可能有助于识别 NP 空间的重要特征。

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