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SARFIMA 模型在传染病预测中的应用:肾综合征出血热的应用及与 SARIMA 的比较。

SARFIMA model prediction for infectious diseases: application to hemorrhagic fever with renal syndrome and comparing with SARIMA.

机构信息

Department of Biostatistics, School of Public Health, Cheeloo College of Medicine, Shandong University, Jinan, China.

Institute of Infectious Disease Control and Prevention, Shandong Center for Disease Control and Prevention, Jinan, China.

出版信息

BMC Med Res Methodol. 2020 Sep 29;20(1):243. doi: 10.1186/s12874-020-01130-8.

Abstract

BACKGROUND

The early warning model of infectious diseases plays a key role in prevention and control. This study aims to using seasonal autoregressive fractionally integrated moving average (SARFIMA) model to predict the incidence of hemorrhagic fever with renal syndrome (HFRS) and comparing with seasonal autoregressive integrated moving average (SARIMA) model to evaluate its prediction effect.

METHODS

Data on notified HFRS cases in Weifang city, Shandong Province were collected from the official website and Shandong Center for Disease Control and Prevention between January 1, 2005 and December 31, 2018. The SARFIMA model considering both the short memory and long memory was performed to fit and predict the HFRS series. Besides, we compared accuracy of fit and prediction between SARFIMA and SARIMA which was used widely in infectious diseases.

RESULTS

Model assessments indicated that the SARFIMA model has better goodness of fit (SARFIMA (1, 0.11, 2)(1, 0, 1): Akaike information criterion (AIC):-631.31; SARIMA (1, 0, 2)(1, 1, 1): AIC: - 227.32) and better predictive ability than the SARIMA model (SARFIMA: root mean square error (RMSE):0.058; SARIMA: RMSE: 0.090).

CONCLUSIONS

The SARFIMA model produces superior forecast performance than the SARIMA model for HFRS. Hence, the SARFIMA model may help to improve the forecast of monthly HFRS incidence based on a long-range dataset.

摘要

背景

传染病的预警模型在防控中起着关键作用。本研究旨在使用季节性自回归分数阶积分移动平均(SARFIMA)模型预测肾综合征出血热(HFRS)的发病率,并与季节性自回归积分移动平均(SARIMA)模型进行比较,以评估其预测效果。

方法

从官方网站和山东省疾病预防控制中心收集了 2005 年 1 月 1 日至 2018 年 12 月 31 日期间山东省潍坊市报告的 HFRS 病例数据。采用同时考虑短期记忆和长期记忆的 SARFIMA 模型对 HFRS 序列进行拟合和预测。此外,我们比较了 SARFIMA 和 SARIMA 模型的拟合和预测精度,SARIMA 模型在传染病中广泛应用。

结果

模型评估表明,SARFIMA 模型具有更好的拟合优度(SARFIMA(1, 0.11, 2)(1, 0, 1):Akaike 信息准则(AIC):-631.31;SARIMA(1, 0, 2)(1, 1, 1):AIC:-227.32)和更好的预测能力比 SARIMA 模型(SARFIMA:均方根误差(RMSE):0.058;SARIMA:RMSE:0.090)。

结论

SARFIMA 模型在 HFRS 预测方面优于 SARIMA 模型。因此,SARFIMA 模型可以帮助基于长期数据集提高 HFRS 月发病率的预测。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/3f16/7526348/bcc0a0f7e695/12874_2020_1130_Fig1_HTML.jpg

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