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免疫评分在结直肠癌微环境中的预后价值。

Prognostic value of immune scores in the microenvironment of colorectal cancer.

作者信息

Yuan Wenliang, Cai Wei, Huang Xiao, Peng Sihua

机构信息

Department of Data Science, College of Mathematics and Information Engineering, Jiaxing University, Jiaxing, Zhejiang 314001, P.R. China.

Key Laboratory of Exploration and Utilization of Aquatic Genetic Resources (Shanghai Ocean University), Ministry of Education, Shanghai 200093, P.R. China.

出版信息

Oncol Lett. 2020 Nov;20(5):256. doi: 10.3892/ol.2020.12119. Epub 2020 Sep 18.

Abstract

Cancer immunotherapy has become an important means of cancer treatment; however, the complex composition and heterogeneity of the colorectal cancer (CRC) microenvironment pose a huge challenge to cancer immunotherapy. Using data downloaded from The Cancer Genome Atlas database, the differences in the microenvironment between cases with low and high immune scores were examined at the multiomics level using bioinformatics approaches. It was revealed that the samples with high immune scores had good cytolytic immune responses and relatively abundant stromal cells, as well as significant infiltration of 22 immune cell subsets and a high non-synonymous mutation burden and neoantigen burden. All of these characteristics contribute to a good prognosis. To better understand the impact of immune-related genes on prognosis, differentially expressed genes between the low and high immune score samples were identified and it was concluded that serpin family Emember 1 (SERPINE1) and ubiquitin C-terminal hydrolase L1 (UCHL1) may be potential therapeutic targets. The relationship between the immune score and the infiltration of 22 immune cells and the difference in SERPINE1 expression were verified by analyzing the GSE17536 and GSE21510 data sets downloaded from the Gene Expression Omnibus database. The present study analyzed the unique properties of immune cells in the CRC microenvironment, which are of great significance for understanding CRC immune mechanism and may also provide novel ideas for the targeted design of cancer immunotherapy.

摘要

癌症免疫疗法已成为癌症治疗的重要手段;然而,结直肠癌(CRC)微环境的复杂组成和异质性给癌症免疫疗法带来了巨大挑战。利用从癌症基因组图谱数据库下载的数据,采用生物信息学方法在多组学水平上研究了免疫评分低和高的病例之间微环境的差异。结果显示,免疫评分高的样本具有良好的细胞溶解免疫反应和相对丰富的基质细胞,以及22种免疫细胞亚群的显著浸润、较高的非同义突变负担和新抗原负担。所有这些特征都有助于良好的预后。为了更好地理解免疫相关基因对预后的影响,鉴定了免疫评分低和高的样本之间的差异表达基因,并得出丝氨酸蛋白酶抑制剂家族E成员1(SERPINE1)和泛素C末端水解酶L1(UCHL1)可能是潜在治疗靶点的结论。通过分析从基因表达综合数据库下载的GSE17536和GSE21510数据集,验证了免疫评分与22种免疫细胞浸润之间的关系以及SERPINE1表达的差异。本研究分析了CRC微环境中免疫细胞的独特特性,这对于理解CRC免疫机制具有重要意义,也可能为癌症免疫疗法的靶向设计提供新思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1631/7509622/f171849c8509/ol-20-05-12119-g00.jpg

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