Liu Yaning, Di Guohu, Hu Shaohua, Zhao Tianyu, Xu Xinkai, Wang Xiaoyi, Chen Peng
Department of Human Anatomy, Histology and Embryology, School of Basic Medicine, Qingdao University, Qingdao, China.
Front Physiol. 2020 Sep 3;11:1010. doi: 10.3389/fphys.2020.01010. eCollection 2020.
This work aimed to identify differentially expressed circular RNAs (circRNAs) and elucidate their potential function in aquaporin 5 (AQP5) knockout (AQP5) mice with the primary dry eye phenotype. A slit lamp examination was performed on AQP5 mice to assess corneal epithelial defects using fluorescein sodium staining. Hematoxylin-eosin staining and transmission electron microscopy analysis were performed to identify structural changes in lacrimal gland epithelial cells due to AQP5 deficiency. The expression profiles of circRNA and messenger RNA (mRNA) were determined by a microarray analysis. The selected circRNA was verified by quantitative real-time reverse transcription-polymerase chain reaction (qRT-PCR). Gene Ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment analyses were performed to predict the biological functions and the potential pathways of parental genes involved in lacrimal gland epithelial cell changes. According to the bioinformatics analysis of identified circRNAs, we predicted a circRNA-miRNA-mRNA network of phagosomes. The AQP5 mice spontaneously exhibit dry eye symptoms, wherein the AQP5 deficiency changes the structure of lacrimal gland epithelial cells. The analysis revealed that, compared to AQP5 mice, 30 circRNAs in the lacrimal glands of AQP5 mice were differentially expressed (fold change ≥ 2.0, < 0.05). Nine upregulated circRNAs were identified using qRT-PCR, and nine upregulated validated circRNAs, 40 altered microRNAs (miRNAs), and nine upregulated mRNAs were identified through a network analysis. The KEGG analysis showed that these nine target genes were expressed in phagosomes. The AQP5 mice have primary and stable dry eye phenotypes from birth. We identified differently expressed circRNAs in the lacrimal glands of AQP5 and AQP5 mice, predicting a circRNA-miRNA-mRNA network of phagosomes. CircRNA likely plays an important role in lacrimal gland epithelial cell pathogenesis. Therefore, it is reasonable to use circRNA as a potential therapeutic agent for the treatment of dry eyes.
本研究旨在鉴定差异表达的环状RNA(circRNA),并阐明其在具有原发性干眼表型的水通道蛋白5(AQP5)基因敲除(AQP5 -/-)小鼠中的潜在功能。对AQP5 -/-小鼠进行裂隙灯检查,使用荧光素钠染色评估角膜上皮缺损情况。进行苏木精 - 伊红染色和透射电子显微镜分析,以确定由于AQP5缺乏导致的泪腺上皮细胞结构变化。通过微阵列分析确定circRNA和信使RNA(mRNA)的表达谱。所选circRNA通过定量实时逆转录 - 聚合酶链反应(qRT - PCR)进行验证。进行基因本体论和京都基因与基因组百科全书(KEGG)通路富集分析,以预测参与泪腺上皮细胞变化的亲本基因的生物学功能和潜在通路。根据对已鉴定circRNA的生物信息学分析,我们预测了吞噬体的circRNA - miRNA - mRNA网络。AQP5 -/-小鼠自发出现干眼症状,其中AQP5缺乏改变了泪腺上皮细胞的结构。分析显示,与野生型小鼠相比,AQP5 -/-小鼠泪腺中有30种circRNA差异表达(折叠变化≥2.0,P < 0.05)。使用qRT - PCR鉴定出9种上调的circRNA,通过网络分析鉴定出9种上调且经验证的circRNA、40种改变的微小RNA(miRNA)和9种上调的mRNA。KEGG分析表明,这9个靶基因在吞噬体中表达。AQP5 -/-小鼠从出生起就具有原发性且稳定的干眼表型。我们在AQP5 -/-和野生型小鼠的泪腺中鉴定出差异表达的circRNA,预测了吞噬体的circRNA - miRNA - mRNA网络。CircRNA可能在泪腺上皮细胞发病机制中起重要作用。因此,将circRNA用作治疗干眼的潜在治疗剂是合理的。