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用于随机照明显微镜的统一关节重建方法。

Unified joint reconstruction approach for random illumination microscopy.

作者信息

Liu Penghuan

机构信息

College of Optical and Electronic Technology, China Jiliang University, 310018 Hangzhou, China.

Laboratoire des Sciences du Numérique de Nantes, École Centrale de Nantes, 44321 Nantes, France.

出版信息

Biomed Opt Express. 2020 Aug 19;11(9):5147-5165. doi: 10.1364/BOE.399547. eCollection 2020 Sep 1.

DOI:10.1364/BOE.399547
PMID:33014605
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7510865/
Abstract

Random illumination microscopy (RIM) using uncontrolled speckle patterns has shown the capacity to surpass the Abbe's diffraction barrier, providing the possibility to design inexpensive and versatile structured illumination microscopy (SIM) devices. In this paper, I first present a review of the state-of-the-art joint reconstruction methods in RIM, and then propose a unified joint reconstruction approach in which the performance of various regularization terms can be evaluated under the same model. The model hyperparameter is easily tuned and robust in comparison to the previous methods and ℓ regularizer is proven to be a reasonable prior in most practical situations. Moreover, the degradation entailed by out-of-focus light in conventional SIM can be easily solved in RIM setup.

摘要

使用无控散斑图案的随机照明显微镜(RIM)已显示出超越阿贝衍射极限的能力,为设计廉价且通用的结构照明显微镜(SIM)设备提供了可能性。在本文中,我首先综述了RIM中最新的联合重建方法,然后提出了一种统一的联合重建方法,在该方法中可以在同一模型下评估各种正则化项的性能。与先前方法相比,该模型超参数易于调整且稳健,并且在大多数实际情况下,ℓ正则化器被证明是一种合理的先验。此外,在RIM设置中可以轻松解决传统SIM中由离焦光引起的退化问题。

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Cell Rep Methods. 2021 Apr 30;1(1):100009. doi: 10.1016/j.crmeth.2021.100009. eCollection 2021 May 24.
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Numerical approach for reducing out-of-focus light in bright-field fluorescence microscopy and superresolution speckle microscopy.用于减少明场荧光显微镜和超分辨率散斑显微镜中离焦光的数值方法。
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Speckle-structured illumination for 3D phase and fluorescence computational microscopy.用于三维相位和荧光计算显微镜的散斑结构照明
Biomed Opt Express. 2019 Jun 26;10(7):3635-3653. doi: 10.1364/BOE.10.003635. eCollection 2019 Jul 1.
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Strategic and practical guidelines for successful structured illumination microscopy.成功的结构光照明显微镜的战略和实用指南。
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Structured illumination microscopy with unknown patterns and a statistical prior.具有未知图案和统计先验的结构照明显微镜术
Biomed Opt Express. 2017 Jan 9;8(2):695-711. doi: 10.1364/BOE.8.000695. eCollection 2017 Feb 1.
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Joint Reconstruction Strategy for Structured Illumination Microscopy With Unknown Illuminations.结构光照明显微镜的未知光照重建策略。
IEEE Trans Image Process. 2017 May;26(5):2480-2493. doi: 10.1109/TIP.2017.2675200. Epub 2017 Feb 24.
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Optical Sectioning and High Resolution in Single-Slice Structured Illumination Microscopy by Thick Slice Blind-SIM Reconstruction.通过厚切片盲态结构照明显微术重建实现单切片结构照明显微术的光学切片和高分辨率
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Opt Lett. 2013 Nov 15;38(22):4723-6. doi: 10.1364/OL.38.004723.
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Fluorescent microscopy beyond diffraction limits using speckle illumination and joint support recovery.利用散斑照明和联合支撑恢复实现超越衍射极限的荧光显微镜。
Sci Rep. 2013;3:2075. doi: 10.1038/srep02075.
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