College of Engineering, Peking University, Beijing 100871, China.
Jiangzhong Cancer Research Center, Jiangxi University of Traditional Chinese Medicine, Nanchang, Jiangxi, China 330004.
Theranostics. 2020 Sep 2;10(24):11026-11048. doi: 10.7150/thno.44053. eCollection 2020.
A fully automated and accurate assay of rare cell phenotypes in densely-packed fluorescently-labeled liquid biopsy images remains elusive. Employing a hybrid artificial intelligence (AI) paradigm that combines traditional rule-based morphological manipulations with modern statistical machine learning, we deployed a next generation software, ALICE (Automated Liquid Biopsy Cell Enumerator) to identify and enumerate minute amounts of tumor cell phenotypes bestrewed in massive populations of leukocytes. As a code designed for futurity, ALICE is armed with internet of things (IOT) connectivity to promote pedagogy and continuing education and also, an advanced cybersecurity system to safeguard against digital attacks from malicious data tampering. By combining robust principal component analysis, random forest classifier and cubic support vector machine, ALICE was able to detect synthetic, anomalous and tampered input images with an average recall and precision of 0.840 and 0.752, respectively. In terms of phenotyping enumeration, ALICE was able to enumerate various circulating tumor cell (CTC) phenotypes with a reliability ranging from 0.725 (substantial agreement) to 0.961 (almost perfect) as compared to human analysts. Further, two subpopulations of circulating hybrid cells (CHCs) were serendipitously discovered and labeled as CHC-1 (DAPI+/CD45+/E-cadherin+/vimentin-) and CHC-2 (DAPI+ /CD45+/E-cadherin+/vimentin+) in the peripheral blood of pancreatic cancer patients. CHC-1 was found to correlate with nodal staging and was able to classify lymph node metastasis with a sensitivity of 0.615 (95% CI: 0.374-0.898) and specificity of 1.000 (95% CI: 1.000-1.000). This study presented a machine-learning-augmented rule-based hybrid AI algorithm with enhanced cybersecurity and connectivity for the automatic and flexibly-adapting enumeration of cellular liquid biopsies. ALICE has the potential to be used in a clinical setting for an accurate and reliable enumeration of CTC phenotypes.
一种全自动且精确的分析技术,可用于对密集荧光标记的液体活检图像中的稀有细胞表型进行分析,但目前仍难以实现。我们采用了一种混合人工智能(AI)范例,将传统的基于规则的形态操作与现代统计机器学习相结合,开发了下一代软件 ALICE(自动液体活检细胞计数仪),用于识别和计数大量白细胞中散布的微量肿瘤细胞表型。作为一种面向未来的代码,ALICE 配备了物联网(IOT)连接功能,以促进教学和继续教育,还配备了先进的网络安全系统,以防止来自恶意数据篡改的数字攻击。通过结合稳健的主成分分析、随机森林分类器和立方支持向量机,ALICE 能够检测到合成的、异常的和篡改的输入图像,平均召回率和精度分别为 0.840 和 0.752。在表型计数方面,与人工分析师相比,ALICE 能够以 0.725(高度一致)到 0.961(几乎完美)的可靠性对各种循环肿瘤细胞(CTC)表型进行计数。此外,在胰腺癌患者的外周血中意外发现并标记了两种循环杂交细胞(CHC)亚群,分别命名为 CHC-1(DAPI+/CD45+/E-cadherin+/vimentin-)和 CHC-2(DAPI+/CD45+/E-cadherin+/vimentin+)。CHC-1 与淋巴结分期相关,并且能够以 0.615(95%CI:0.374-0.898)的灵敏度和 1.000(95%CI:1.000-1.000)的特异性对淋巴结转移进行分类。本研究提出了一种基于机器学习增强的基于规则的混合人工智能算法,具有增强的网络安全和连接性,用于自动灵活地对细胞液体活检进行计数。ALICE 有可能在临床环境中用于准确可靠地计数 CTC 表型。