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随机图灵模式的精度与耗散

Precision and dissipation of a stochastic Turing pattern.

作者信息

Rana Shubhashis, Barato Andre C

机构信息

Department of Physics, University of Houston, Houston, Texas 77204, USA.

出版信息

Phys Rev E. 2020 Sep;102(3-1):032135. doi: 10.1103/PhysRevE.102.032135.

Abstract

Spontaneous pattern formation is a fundamental scientific problem that has received much attention since the seminal theoretical work of Turing on reaction-diffusion systems. In molecular biophysics, this phenomenon often takes place under the influence of large fluctuations. It is then natural to inquire about the precision of such pattern. In particular, spontaneous pattern formation is a nonequilibrium phenomenon, and the relation between the precision of a pattern and the thermodynamic cost associated with it remains largely unexplored. Here, we analyze this relation with a paradigmatic stochastic reaction-diffusion model, i.e., the Brusselator in one spatial dimension. We find that the precision of the pattern is maximized for an intermediate thermodynamic cost, i.e., increasing the thermodynamic cost beyond this value makes the pattern less precise. Even though fluctuations get less pronounced with an increase in thermodynamic cost, we argue that larger fluctuations can also have a positive effect on the precision of the pattern.

摘要

自图灵关于反应扩散系统的开创性理论工作以来,自发模式形成一直是一个备受关注的基础科学问题。在分子生物物理学中,这种现象通常在大波动的影响下发生。自然而然地,人们会探究这种模式的精度。特别是,自发模式形成是一种非平衡现象,模式精度与与之相关的热力学代价之间的关系在很大程度上仍未得到探索。在这里,我们用一个典型的随机反应扩散模型,即一维空间中的布鲁塞尔振子,来分析这种关系。我们发现,对于中等热力学代价,模式精度达到最大值,也就是说,将热力学代价增加到超过这个值会使模式精度降低。尽管随着热力学代价的增加波动变得不那么明显,但我们认为较大的波动也可能对模式精度产生积极影响。

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