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从多环芳烃污染土壤中分离出的蒽降解菌株费氏分枝杆菌LB501T的全基因组序列草图

Draft Whole-Genome Sequence of the Anthracene-Degrading Strain Mycolicibacterium frederiksbergense LB501T, Isolated from a Polycyclic Aromatic Hydrocarbon-Contaminated Soil.

作者信息

Augelletti Floriana, Tremblay Julien, Agathos Spiros N, Jousset Alexandre, Stenuit Ben

机构信息

Earth & Life Institute, Laboratory of Bioengineering, Catholic University of Louvain, Louvain-la-Neuve, Belgium.

Energy, Mining and Environment, National Research Council Canada, Montreal, Quebec, Canada.

出版信息

Microbiol Resour Announc. 2020 Oct 22;9(43):e00671-20. doi: 10.1128/MRA.00671-20.

DOI:10.1128/MRA.00671-20
PMID:33093053
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7585852/
Abstract

Here, we report the draft whole-genome sequence of an anthracene-degrading bacterium, strain LB501T, using the PacBio and Illumina sequencing platforms. The complete genome sequence of strain LB501T consists of 6,713,618 bp and provides new insights into its metabolic capabilities, including aromatic conversion pathways with promiscuous activities.

摘要

在此,我们报告了一株蒽降解细菌LB501T菌株的全基因组序列草图,该序列通过PacBio和Illumina测序平台获得。LB501T菌株的完整基因组序列由6,713,618个碱基对组成,并为其代谢能力提供了新的见解,包括具有混杂活性的芳香族化合物转化途径。

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1
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2
Key Transitions in the Evolution of Rapid and Slow Growing Identified by Comparative Genomics.通过比较基因组学确定的快速生长和缓慢生长进化中的关键转变。
Front Microbiol. 2020 Jan 21;10:3019. doi: 10.3389/fmicb.2019.03019. eCollection 2019.
3
Phylogenomics and Comparative Genomic Studies Robustly Support Division of the Genus into an Emended Genus and Four Novel Genera.系统发育基因组学和比较基因组学研究有力支持将该属划分为一个修订后的属和四个新属。
Front Microbiol. 2018 Feb 13;9:67. doi: 10.3389/fmicb.2018.00067. eCollection 2018.
4
Characterization of a polycyclic aromatic ring-hydroxylation dioxygenase from Mycobacterium sp. NJS-P.来自分枝杆菌属NJS-P的多环芳烃环羟基化双加氧酶的特性分析
Chemosphere. 2017 Oct;185:67-74. doi: 10.1016/j.chemosphere.2017.07.001. Epub 2017 Jul 2.
5
NCBI prokaryotic genome annotation pipeline.美国国立生物技术信息中心原核生物基因组注释管道
Nucleic Acids Res. 2016 Aug 19;44(14):6614-24. doi: 10.1093/nar/gkw569. Epub 2016 Jun 24.
6
SSPACE-LongRead: scaffolding bacterial draft genomes using long read sequence information.SSPACE-LongRead:利用长读段序列信息搭建细菌草图基因组支架
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7
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8
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9
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10
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BMC Biochem. 2008 Apr 3;9:11. doi: 10.1186/1471-2091-9-11.