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机器学习预测 COVID-19 肺炎患者呼吸衰竭:全球卫生紧急情况下的挑战、优势和机遇。

Machine learning in predicting respiratory failure in patients with COVID-19 pneumonia-Challenges, strengths, and opportunities in a global health emergency.

机构信息

Department of Surgical, Medical, Dental and Morphological Sciences, University of Modena and Reggio Emilia, Modena, Italy.

Department of Physical, Computer and Mathematical Sciences, University of Modena and Reggio Emilia, Modena, Italy.

出版信息

PLoS One. 2020 Nov 12;15(11):e0239172. doi: 10.1371/journal.pone.0239172. eCollection 2020.

Abstract

AIMS

The aim of this study was to estimate a 48 hour prediction of moderate to severe respiratory failure, requiring mechanical ventilation, in hospitalized patients with COVID-19 pneumonia.

METHODS

This was an observational prospective study that comprised consecutive patients with COVID-19 pneumonia admitted to hospital from 21 February to 6 April 2020. The patients' medical history, demographic, epidemiologic and clinical data were collected in an electronic patient chart. The dataset was used to train predictive models using an established machine learning framework leveraging a hybrid approach where clinical expertise is applied alongside a data-driven analysis. The study outcome was the onset of moderate to severe respiratory failure defined as PaO2/FiO2 ratio <150 mmHg in at least one of two consecutive arterial blood gas analyses in the following 48 hours. Shapley Additive exPlanations values were used to quantify the positive or negative impact of each variable included in each model on the predicted outcome.

RESULTS

A total of 198 patients contributed to generate 1068 usable observations which allowed to build 3 predictive models based respectively on 31-variables signs and symptoms, 39-variables laboratory biomarkers and 91-variables as a composition of the two. A fourth "boosted mixed model" included 20 variables was selected from the model 3, achieved the best predictive performance (AUC = 0.84) without worsening the FN rate. Its clinical performance was applied in a narrative case report as an example.

CONCLUSION

This study developed a machine model with 84% prediction accuracy, which is able to assist clinicians in decision making process and contribute to develop new analytics to improve care at high technology readiness levels.

摘要

目的

本研究旨在估算 48 小时内患有 COVID-19 肺炎的住院患者发生需要机械通气的中重度呼吸衰竭的概率。

方法

这是一项观察性前瞻性研究,纳入了 2020 年 2 月 21 日至 4 月 6 日期间因 COVID-19 肺炎住院的连续患者。患者的病史、人口统计学、流行病学和临床数据均在电子病历中采集。使用建立的机器学习框架对数据集进行预测模型训练,该框架采用了一种混合方法,既结合了临床专业知识,又进行了数据驱动分析。研究结果为在接下来的 48 小时内,至少有两次连续动脉血气分析中 PaO2/FiO2 比值<150mmHg,定义为中重度呼吸衰竭的发生。使用 Shapley Additive exPlanations 值来量化每个模型中包含的每个变量对预测结果的正或负面影响。

结果

共有 198 例患者参与,生成了 1068 个可用观察值,从而分别基于 31 个变量的体征和症状、39 个变量的实验室生物标志物以及这两个变量的组合构建了 3 个预测模型。第四个“增强混合模型”从模型 3 中选择了 20 个变量,其预测性能最佳(AUC=0.84),且不增加假阴性率。其临床性能作为一个案例报告进行了叙述。

结论

本研究开发了一种具有 84%预测准确性的机器模型,能够帮助临床医生做出决策,并有助于开发新的分析方法,以提高在高技术准备水平下的护理水平。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/796b/7660476/f80e4b3703a5/pone.0239172.g001.jpg

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