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用于机器学习预测接受化疗的乳腺癌女性化疗脑的功能和结构连接组特征

Functional and Structural Connectome Features for Machine Learning Chemo-Brain Prediction in Women Treated for Breast Cancer with Chemotherapy.

作者信息

Chen Vincent Chin-Hung, Lin Tung-Yeh, Yeh Dah-Cherng, Chai Jyh-Wen, Weng Jun-Cheng

机构信息

School of Medicine, Chang Gung University, Taoyuan 33302, Taiwan.

Department of Psychiatry, Chang Gung Memorial Hospital, Chiayi 61363, Taiwan.

出版信息

Brain Sci. 2020 Nov 12;10(11):851. doi: 10.3390/brainsci10110851.

Abstract

Breast cancer is the leading cancer among women worldwide, and a high number of breast cancer patients are struggling with psychological and cognitive disorders. In this study, we aim to use machine learning models to discriminate between chemo-brain participants and healthy controls (HCs) using connectomes (connectivity matrices) and topological coefficients. Nineteen female post-chemotherapy breast cancer (BC) survivors and 20 female HCs were recruited for this study. Participants in both groups received resting-state functional magnetic resonance imaging (rs-fMRI) and generalized q-sampling imaging (GQI). Logistic regression (LR), decision tree classifier (CART), and xgboost (XGB) were the models we adopted for classification. In connectome analysis, LR achieved an accuracy of 79.49% with the functional connectomes and an accuracy of 71.05% with the structural connectomes. In the topological coefficient analysis, accuracies of 87.18%, 82.05%, and 83.78% were obtained by the functional global efficiency with CART, the functional global efficiency with XGB, and the structural transitivity with CART, respectively. The areas under the curves (AUCs) were 0.93, 0.94, 0.87, 0.88, and 0.84, respectively. Our study showed the discriminating ability of functional connectomes, structural connectomes, and global efficiency. We hope our findings can contribute to an understanding of the chemo brain and the establishment of a clinical system for tracking chemo brain.

摘要

乳腺癌是全球女性中最常见的癌症,大量乳腺癌患者正在与心理和认知障碍作斗争。在本研究中,我们旨在使用机器学习模型,通过连接组(连接矩阵)和拓扑系数来区分化疗脑参与者和健康对照者(HCs)。本研究招募了19名化疗后的女性乳腺癌(BC)幸存者和20名女性HCs。两组参与者均接受静息态功能磁共振成像(rs-fMRI)和广义q采样成像(GQI)。我们采用逻辑回归(LR)、决策树分类器(CART)和极端梯度提升(XGB)进行分类。在连接组分析中,LR在功能连接组上的准确率为79.49%,在结构连接组上的准确率为71.05%。在拓扑系数分析中,CART的功能全局效率、XGB的功能全局效率和CART的结构传递性分别获得了87.18%、82.05%和83.78%的准确率。曲线下面积(AUC)分别为0.93、0.94、0.87、0.88和0.84。我们的研究显示了功能连接组、结构连接组和全局效率的区分能力。我们希望我们的发现有助于理解化疗脑,并建立一个跟踪化疗脑的临床系统。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e9b1/7696512/89a2160a8561/brainsci-10-00851-g001.jpg

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