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地方性濒危种麻栎(Ulmus lamellosa)的种群历史和遗传分化。

Demographic history and genetic differentiation of an endemic and endangered Ulmus lamellosa (Ulmus).

机构信息

School of Life Science, Shanxi Normal University, Linfen, 041000, P. R. China.

Saint Mary's University, Halifax, Canada.

出版信息

BMC Plant Biol. 2020 Nov 17;20(1):526. doi: 10.1186/s12870-020-02723-7.

Abstract

BACKGROUND

Ulmus lamellosa (one of the ancient species of Ulmus) is an endemic and endangered plant that has undergone climatic oscillations and geographical changes. The elucidation of its demographic history and genetic differentiation is critical for understanding the evolutionary process and ecological adaption to forests in Northern China.

RESULTS

Polymorphic haplotypes were detected in most populations of U. lamellosa via DNA sequencing. All haplotypes were divided into three phylogeographic clades fundamentally corresponding to their geographical distribution, namely THM (Taihang Mountains), YM (Yinshan Mountains), and YSM (Yanshan Mountains) groups. The YSM group, which is regarded as ancestral, possessed higher genetic diversity and significant genetic variability in contrast to the YSM and YM groups. Meanwhile, the divergence time of intraspecies haplotypes occurred during the Miocene-Pliocene, which was associated with major Tertiary geological and/or climatic events. Different degrees of gene exchanges were identified between the three groups. During glaciation, the YSM and THM regions might have served as refugia for U. lamellosa. Based on ITS data, range expansion was not expected through evolutionary processes, except for the THM group. A series of mountain uplifts (e.g., Yanshan Mountains and Taihang Mountains) following the Miocene-Pliocene, and subsequently quaternary climatic oscillations in Northern China, further promoted divergence between U. lamellosa populations.

CONCLUSIONS

Geographical topology and climate change in Northern China played a critical role in establishing the current phylogeographic structural patterns of U. lamellosa. These results provide important data and clues that facilitate the demographic study of tree species in Northern China.

摘要

背景

榆属(榆属的古老物种之一)是一种地方性濒危植物,经历了气候波动和地理变化。阐明其种群历史和遗传分化对于理解中国北方森林的进化过程和生态适应至关重要。

结果

通过 DNA 测序,在榆属的大多数种群中检测到多态性单倍型。所有单倍型基本上分为三个地理谱系群,即 THM(太行山脉)、YM(阴山山脉)和 YSM(燕山山脉)群。YSM 群被认为是祖先,与 YSM 和 YM 群相比,具有更高的遗传多样性和显著的遗传变异性。同时,种内单倍型的分化时间发生在中新世-上新世,与第三纪主要地质和/或气候事件有关。三个群体之间存在不同程度的基因交流。在冰川时期,YSM 和 THM 地区可能是榆属的避难所。基于 ITS 数据,除了 THM 组外,预计榆属不会通过进化过程发生范围扩张。中新世-上新世之后的一系列山脉隆升(如燕山山脉和太行山脉),以及随后中国北方第四纪气候波动,进一步促进了榆属种群的分化。

结论

中国北方的地理拓扑结构和气候变化在中国北方榆属当前的地理谱系结构模式的建立中发挥了关键作用。这些结果为中国北方树种的种群研究提供了重要的数据和线索。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9e31/7672979/5fd59a68be10/12870_2020_2723_Fig1_HTML.jpg

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