Department of Engineering, Graduate School of Integrated Science and Technology, Shizuoka University, 3-5-1 Johoku, Naka-ku, Hamamatsu, 432-8561, Japan.
Department of Science, Graduate School of Integrated Science and Technology, Shizuoka University, 836 Ohya, Suruga-ku, Shizuoka, 422-8529, Japan.
Sci Rep. 2020 Nov 18;10(1):20066. doi: 10.1038/s41598-020-77133-8.
Levoglucosan (LG) is an anhydrosugar produced through glucan pyrolysis and is widely found in nature. We previously isolated an LG-utilizing thermophile, Bacillus smithii S-2701M, and suggested that this bacterium may have a metabolic pathway from LG to glucose, initiated by LG dehydrogenase (LGDH). Here, we completely elucidated the metabolic pathway of LG involving three novel enzymes in addition to LGDH. In the S-2701M genome, three genes expected to be involved in the LG metabolism were found in the vicinity of the LGDH gene locus. These four genes including LGDH gene (lgdA, lgdB1, lgdB2, and lgdC) were expressed in Escherichia coli and purified to obtain functional recombinant proteins. Thin layer chromatography analyses of the reactions with the combination of the four enzymes elucidated the following metabolic pathway: LgdA (LGDH) catalyzes 3-dehydrogenation of LG to produce 3-keto-LG, which undergoes β-elimination of 3-keto-LG by LgdB1, followed by hydration to produce 3-keto-D-glucose by LgdB2; next, LgdC reduces 3-keto-D-glucose to glucose. This sequential reaction mechanism resembles that proposed for an enzyme belonging to glycoside hydrolase family 4, and results in the observational hydrolysis of LG into glucose with coordination of the four enzymes.
左旋葡聚糖(LG)是一种通过葡聚糖热解产生的无水糖,广泛存在于自然界中。我们之前分离到一种利用 LG 的嗜热菌,即史密斯芽孢杆菌 S-2701M,并提出该细菌可能具有从 LG 到葡萄糖的代谢途径,由 LG 脱氢酶(LGDH)起始。在这里,我们除了 LGDH 之外,还通过三种新酶的鉴定,完整阐明了 LG 的代谢途径。在 S-2701M 基因组中,在 LGDH 基因座附近发现了三个预期参与 LG 代谢的基因。这四个基因(包括 lgdA、lgdB1、lgdB2 和 lgdC)在大肠杆菌中表达并纯化以获得功能性重组蛋白。用这四种酶组合进行的反应的薄层色谱分析阐明了以下代谢途径:LgdA(LGDH)催化 LG 的 3-脱氢反应生成 3-酮-LG,3-酮-LG 由 LgdB1 进行 β-消除,然后由 LgdB2 水合生成 3-酮-D-葡萄糖;接下来,LgdC 将 3-酮-D-葡萄糖还原为葡萄糖。这种顺序反应机制类似于归属于糖苷水解酶家族 4 的酶的提议,并且导致在四种酶的协调下,LG 水解成葡萄糖。