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凡纳滨对虾抗白斑综合征病毒的基因组选择在实验性攻毒试验中提高了存活率。

Genomic selection for white spot syndrome virus resistance in whiteleg shrimp boosts survival under an experimental challenge test.

作者信息

Lillehammer Marie, Bangera Rama, Salazar Marcela, Vela Sergio, Erazo Edna C, Suarez Andres, Cock James, Rye Morten, Robinson Nicholas Andrew

机构信息

Breeding and Genetics, Nofima, 1430, Ås, Norway.

Benchmark Genetics Norway AS, 6600, Sunndalsøra, Norway.

出版信息

Sci Rep. 2020 Nov 25;10(1):20571. doi: 10.1038/s41598-020-77580-3.

Abstract

White spot syndrome virus (WSSV) causes major worldwide losses in shrimp aquaculture. The development of resistant shrimp populations is an attractive option for management of the disease. However, heritability for WSSV resistance is generally low and genetic improvement by conventional selection has been slow. This study was designed to determine the power and accuracy of genomic selection to improve WSSV resistance in Litopenaeus vannamei. Shrimp were experimentally challenged with WSSV and resistance was evaluated as dead or alive (DOA) 23 days after infestation. All shrimp in the challenge test were genotyped for 18,643 single nucleotide polymorphisms. Breeding candidates (G) were ranked on genomic breeding values for WSSV resistance. Two G populations were produced, one from G breeders with high and the other with low estimated breeding values. A third population was produced from "random" mating of parent stock. The average survival was 25% in the low, 38% in the random and 51% in the high-genomic breeding value groups. Genomic heritability for DOA (0.41 in G) was high for this type of trait. The realised genetic gain and high heritability clearly demonstrates large potential for further genetic improvement of WSSV resistance in the evaluated L. vannamei population using genomic selection.

摘要

白斑综合征病毒(WSSV)给全球对虾养殖业造成了重大损失。培育抗病对虾种群是该病防控的一个有吸引力的选择。然而,对WSSV抗性的遗传力通常较低,通过传统选择进行的遗传改良进展缓慢。本研究旨在确定基因组选择提高凡纳滨对虾WSSV抗性的效力和准确性。对虾进行WSSV实验性攻毒,并在感染后23天以存活或死亡(DOA)来评估抗性。攻毒试验中的所有对虾都针对18,643个单核苷酸多态性进行了基因分型。根据对WSSV抗性的基因组育种值对育种候选个体(G)进行排名。产生了两个G群体,一个来自估计育种值高的G育种者,另一个来自估计育种值低的G育种者。第三个群体由亲虾“随机”交配产生。低基因组育种值组的平均存活率为25%,随机组为38%,高基因组育种值组为51%。对于此类性状,DOA的基因组遗传力(G中为0.41)较高。实际的遗传进展和高遗传力清楚地表明,利用基因组选择在评估的凡纳滨对虾种群中进一步提高WSSV抗性具有很大潜力。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/2f42/7688931/dbedad94c9b6/41598_2020_77580_Fig1_HTML.jpg

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