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蚯蚓再生过程中作用于RNA的腺苷脱氨酶(ADAR)的鉴定及时空表达:其在肌肉再分化中的可能意义

Identification and Spatiotemporal Expression of Adenosine Deaminases Acting on RNA (ADAR) during Earthworm Regeneration: Its Possible Implication in Muscle Redifferentiation.

作者信息

Yoon Yoo Bin, Yu Yun-Sang, Park Beom Jun, Cho Sung-Jin, Park Soon Cheol

机构信息

Department of Life Science, Chung-Ang University, Seoul 06974, Korea.

School of Biological Sciences, College of Natural Sciences, Chungbuk National University, Cheongju 28644, Korea.

出版信息

Biology (Basel). 2020 Dec 5;9(12):448. doi: 10.3390/biology9120448.

Abstract

Adenosine deaminases acting on RNA (ADAR) catalyze the hydrolytic deamination of adenosine (A) to produce inosine (I) in double-stranded RNA substrates. A-to-I RNA editing has increasingly broad physiological significance in development, carcinogenesis, and environmental adaptation. is an earthworm with potent regenerative potential; it can regenerate the head and tail and is an advantageous model system to investigate the molecular mechanisms of regeneration. During RNA sequencing analysis of regenerates, we identified an homolog (), which led us to examine its spatial and temporal expression to comprehend how is linked to regeneration. At first, in domain analysis, we discovered that only has one double-stranded RNA-binding domain (dsRBD) and a deaminase domain without a Z-DNA-binding domain (ZBD). In addition, a comparison of the core deaminase domains of with those of other ADAR family members indicated that comprises the conserved three active-site motifs and a glutamate residue for catalytic activity. also shares 11 conserved residues, a characteristic of ADAR1, supporting that is a member of ADAR1 class. Its temporal expression was remarkably low in the early stages of regeneration before suddenly increasing at 10 days post amputation (dpa) when diverse cell types and tissues were being regenerated. In situ hybridization of messenger RNA (mRNA) indicated that the main expression was observed in regenerating muscle layers and related connective tissues. Taken together, the present results demonstrate that an RNA-editing enzyme, , is implicated in muscle redifferentiation during earthworm regeneration.

摘要

作用于RNA的腺苷脱氨酶(ADAR)催化双链RNA底物中腺苷(A)的水解脱氨反应,生成肌苷(I)。A到I的RNA编辑在发育、致癌作用和环境适应中具有越来越广泛的生理意义。蚯蚓具有强大的再生潜力,它可以再生头部和尾部,是研究再生分子机制的有利模型系统。在对蚯蚓再生体进行RNA测序分析时,我们鉴定出了一个ADAR同源物(Edu-ADAR),这使我们研究其时空表达,以了解Edu-ADAR如何与再生相关联。首先,在结构域分析中,我们发现Edu-ADAR只有一个双链RNA结合结构域(dsRBD)和一个没有Z-DNA结合结构域(ZBD)的脱氨酶结构域。此外,将Edu-ADAR的核心脱氨酶结构域与其他ADAR家族成员的结构域进行比较表明,Edu-ADAR包含保守的三个活性位点基序和一个用于催化活性的谷氨酸残基。Edu-ADAR还共享11个保守残基,这是ADAR1的一个特征,支持Edu-ADAR是ADAR1类的成员。其在再生早期的表达非常低,在截肢后10天(dpa)突然增加,此时各种细胞类型和组织正在再生。Edu-ADAR信使核糖核酸(mRNA)的原位杂交表明,主要表达出现在再生的肌肉层和相关结缔组织中。综上所述,目前的结果表明,一种RNA编辑酶Edu-ADAR参与了蚯蚓再生过程中的肌肉再分化。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/08cc/7762157/ad8f9862a4e6/biology-09-00448-g001.jpg

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