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从单细胞迁移到群体细胞迁移的衔接:模型综述及其与实验的联系。

Bridging from single to collective cell migration: A review of models and links to experiments.

机构信息

Department of Mathematics, University of British Columbia, Vancouver, Canada.

出版信息

PLoS Comput Biol. 2020 Dec 10;16(12):e1008411. doi: 10.1371/journal.pcbi.1008411. eCollection 2020 Dec.

DOI:10.1371/journal.pcbi.1008411
PMID:33301528
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7728230/
Abstract

Mathematical and computational models can assist in gaining an understanding of cell behavior at many levels of organization. Here, we review models in the literature that focus on eukaryotic cell motility at 3 size scales: intracellular signaling that regulates cell shape and movement, single cell motility, and collective cell behavior from a few cells to tissues. We survey recent literature to summarize distinct computational methods (phase-field, polygonal, Cellular Potts, and spherical cells). We discuss models that bridge between levels of organization, and describe levels of detail, both biochemical and geometric, included in the models. We also highlight links between models and experiments. We find that models that span the 3 levels are still in the minority.

摘要

数学和计算模型可以帮助我们从多个组织层面理解细胞行为。在这里,我们回顾了文献中的模型,这些模型集中在 3 个大小尺度上的真核细胞运动:调节细胞形状和运动的细胞内信号转导、单细胞运动以及从几个细胞到组织的细胞集体行为。我们调查了最近的文献,总结了不同的计算方法(相场、多边形、细胞势和球体细胞)。我们讨论了在组织层面之间建立联系的模型,并描述了模型中包含的生化和几何细节的详细程度。我们还强调了模型与实验之间的联系。我们发现,跨越 3 个层次的模型仍然很少。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/73a03e37ce3b/pcbi.1008411.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/a912f583de06/pcbi.1008411.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/6f6a8f6ec7c2/pcbi.1008411.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/e8547ab68b1b/pcbi.1008411.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/aa3110a22779/pcbi.1008411.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/73a03e37ce3b/pcbi.1008411.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/a912f583de06/pcbi.1008411.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/6f6a8f6ec7c2/pcbi.1008411.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/e8547ab68b1b/pcbi.1008411.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/aa3110a22779/pcbi.1008411.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/384f/7728230/73a03e37ce3b/pcbi.1008411.g005.jpg

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Large-Scale Dynamics of Self-propelled Particles Moving Through Obstacles: Model Derivation and Pattern Formation.自主运动颗粒在障碍物中迁移的大规模动力学:模型推导与模式形成。
Bull Math Biol. 2020 Sep 25;82(10):129. doi: 10.1007/s11538-020-00805-z.
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Biomechanics of Collective Cell Migration in Cancer Progression: Experimental and Computational Methods.
Eur Phys J E Soft Matter. 2025 Mar 4;48(3):12. doi: 10.1140/epje/s10189-024-00466-z.
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Collective Transitions from Orbiting to Matrix Invasion in 3D Multicellular Spheroids.三维多细胞球体中从轨道运动到基质侵袭的集体转变
bioRxiv. 2025 Feb 11:2025.02.10.636936. doi: 10.1101/2025.02.10.636936.
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Model supports asymmetric regulation across the intercellular junction for collective cell polarization.该模型支持跨细胞间连接的不对称调节,以实现集体细胞极化。
PLoS Comput Biol. 2024 Dec 17;20(12):e1012216. doi: 10.1371/journal.pcbi.1012216. eCollection 2024 Dec.
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Personalizing computational models to construct medical digital twins.个性化计算模型以构建医学数字孪生体。
bioRxiv. 2024 Nov 7:2024.05.31.596692. doi: 10.1101/2024.05.31.596692.
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How cytoskeletal crosstalk makes cells move: Bridging cell-free and cell studies.细胞骨架串扰如何使细胞移动:连接无细胞研究和细胞研究。
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