• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利：CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法，用中文像聊天一样搜索，搜遍4000万医学文献。AI智能推荐，让科研检索更轻松。

立即免费搜索

文件翻译

保留排版，准确专业，支持PDF/Word/PPT等文件格式，支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述，25分钟生成高质量综述，智能提取关键信息，辅助科研写作。

立即免费体验

濒危非洲特有树种波伊尔的微卫星标记的分离与鉴定

Isolation and characterization of microsatellite markers for the threatened African endemic tree species Poir.

作者信息

Johnson Benziwa Nathalie, Quashie Marie Luce Akossiwoa, Chaix Gilles, Camus-Kulandaivelu Letizia, Adjonou Kossi, Segla Kossi Novinyo, Kokutse Adzo Dzifa, Ouinsavi Christine, Bationo Babou André, Rabiou Habou, Kokou Kouami, Vignes Hélène

机构信息

Laboratoire de Recherche Forestière (LRF) Université de Lomé Lomé Togo.

CIRAD, UMR AGAP Montpellier France.

出版信息

Ecol Evol. 2020 Oct 27;10(23):13403-13411. doi: 10.1002/ece3.6944. eCollection 2020 Dec.

DOI:10.1002/ece3.6944
PMID:33304547
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7713909/
Abstract

To study the genetic diversity and structure of the forest species Poir., seventeen polymorphic nuclear microsatellite markers were isolated and characterized, using next-generation sequencing. Three hundred and sixty-five (365) individuals were analyzed within fifteen (15) West African populations. The number of alleles for these loci varied from 4 to 30, and the heterozygosity varied from 0.23 to 0.82. The seventeen (17) primers designed here will allow characterizing the genetic diversity of this threaten species on its natural stands and to better understand the population differentiation mechanisms shaping it.

摘要

为了研究森林物种Poir.的遗传多样性和结构，利用下一代测序技术分离并鉴定了17个多态性核微卫星标记。对15个西非种群中的365个个体进行了分析。这些位点的等位基因数量从4个到30个不等，杂合度从0.23到0.82不等。在此设计的17个引物将有助于在其自然林分中表征这种濒危物种的遗传多样性，并更好地理解塑造它的种群分化机制。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c31/7713909/8b7368f93aaa/ECE3-10-13403-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c31/7713909/8b7368f93aaa/ECE3-10-13403-g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6c31/7713909/8b7368f93aaa/ECE3-10-13403-g001.jpg

相似文献

1
Isolation and characterization of microsatellite markers for the threatened African endemic tree species Poir.濒危非洲特有树种波伊尔的微卫星标记的分离与鉴定
Ecol Evol. 2020 Oct 27;10(23):13403-13411. doi: 10.1002/ece3.6944. eCollection 2020 Dec.
2
Genome sequencing and characterization of microsatellite markers of L.f.: an economically important endangered tree of Eastern Ghats, India.基因组测序和微卫星标记的特征分析 L.f.：印度东高止山脉一种具有重要经济价值的濒危树种。
J Genet. 2023;102.
3
Development and characterization of microsatellite markers in the African deciduous tree Terminalia superba (Combretaceae).非洲落叶乔木 Terminalia superba（使君子科）微卫星标记的开发与特征分析
Appl Plant Sci. 2015 Dec 9;3(12). doi: 10.3732/apps.1500070. eCollection 2015 Dec.
4
Genetic diversity and gene flow in a Caribbean tree Pterocarpus officinalis Jacq.: a study based on chloroplast and nuclear microsatellites.加勒比树木药用紫檀（Pterocarpus officinalis Jacq.）的遗传多样性与基因流：基于叶绿体和核微卫星的研究
Genetica. 2009 Mar;135(2):185-98. doi: 10.1007/s10709-008-9268-4. Epub 2008 Apr 23.
5
Isolation and characterization of 12 microsatellite loci in soapbark, Quillaja saponaria (Quillajaceae).皂树（皂树科）12个微卫星位点的分离与特征分析
Appl Plant Sci. 2015 May 11;3(5). doi: 10.3732/apps.1500024. eCollection 2015 May.
6
Development of microsatellite primers in the protected species Viola elatior (Violaceae) using next-generation sequencing.利用下一代测序技术开发受保护物种高堇菜（堇菜科）的微卫星引物
Appl Plant Sci. 2015 May 13;3(5). doi: 10.3732/apps.1500011. eCollection 2015 May.
7
Vulnerability of African Rosewood ( Fabaceae) natural stands to climate change and implications for silviculture in West Africa.非洲紫檀（豆科）天然林对气候变化的脆弱性及其对西非造林的影响。
Heliyon. 2020 Jun 2;6(6):e04031. doi: 10.1016/j.heliyon.2020.e04031. eCollection 2020 Jun.
8
Development of polymorphic microsatellite markers for Fagus pashanica (Fagaceae) using next-generation sequencing.利用下一代测序技术开发朴树（壳斗科）的多态微卫星标记。
Genes Genet Syst. 2023 Nov 21;98(5):277-281. doi: 10.1266/ggs.23-00160. Epub 2023 Oct 26.
9
Development and characterization of microsatellite markers in the African forest elephant (Loxodonta cyclotis).非洲森林象（Loxodonta cyclotis）微卫星标记的开发与特征分析
BMC Res Notes. 2016 Jul 26;9:364. doi: 10.1186/s13104-016-2167-3.
10
Development of polymorphic microsatellite markers for tree peony Paeonia delavayi (Paeoniaceae) using ddRAD-seq data.利用 ddRAD-seq 数据开发牡丹（芍药科）多态微卫星标记。
Mol Biol Rep. 2019 Aug;46(4):4605-4610. doi: 10.1007/s11033-019-04831-6. Epub 2019 Apr 30.

本文引用的文献

1
Comparative Analyses of Five Complete Chloroplast Genomes from the Genus (Fabacaeae).五种蒺藜科猪屎豆属植物叶绿体基因组的比较分析
Int J Mol Sci. 2020 May 26;21(11):3758. doi: 10.3390/ijms21113758.
2
High-Throughput Sequencing Strategy for Microsatellite Genotyping Using Neotropical Fish as a Model.以新热带鱼为模型的微卫星基因分型高通量测序策略
Front Genet. 2018 Mar 9;9:73. doi: 10.3389/fgene.2018.00073. eCollection 2018.
3
ANALYZING TABLES OF STATISTICAL TESTS.分析统计检验表
Evolution. 1989 Jan;43(1):223-225. doi: 10.1111/j.1558-5646.1989.tb04220.x.
4
Development of microsatellite markers using Illumina MiSeq sequencing to characterize (Ephedraceae).利用Illumina MiSeq测序技术开发微卫星标记以表征麻黄科植物。
Appl Plant Sci. 2017 Mar 10;5(3). doi: 10.3732/apps.1600104. eCollection 2017 Mar.
5
Microsatellite markers: what they mean and why they are so useful.微卫星标记：它们的含义以及为何如此有用。
Genet Mol Biol. 2016 Jul-Sep;39(3):312-28. doi: 10.1590/1678-4685-GMB-2016-0027. Epub 2016 Aug 4.
6
Combining next-generation sequencing and online databases for microsatellite development in non-model organisms.结合新一代测序技术与在线数据库用于非模式生物的微卫星开发。
Sci Rep. 2013 Dec 3;3:3376. doi: 10.1038/srep03376.
7
GenAlEx 6.5: genetic analysis in Excel. Population genetic software for teaching and research--an update.GenAlEx 6.5：Excel 中的遗传分析。用于教学和研究的种群遗传软件--更新。
Bioinformatics. 2012 Oct 1;28(19):2537-9. doi: 10.1093/bioinformatics/bts460. Epub 2012 Jul 20.
8
Pharmacological properties and related constituents of stem bark of Pterocarpus erinaceus Poir. (Fabaceae).紫檀（豆科紫檀属）茎皮的药理学性质及相关成分。
Asian Pac J Trop Med. 2012 Jan;5(1):46-51. doi: 10.1016/S1995-7645(11)60244-7.
9
ABySS: a parallel assembler for short read sequence data.ABySS：一种用于短读长序列数据的并行汇编器。
Genome Res. 2009 Jun;19(6):1117-23. doi: 10.1101/gr.089532.108. Epub 2009 Feb 27.
10
Antimalarial activity of Sida acuta Burm. f. (Malvaceae) and Pterocarpus erinaceus Poir. (Fabaceae).刺蒴麻（锦葵科）和非洲紫檀（豆科）的抗疟活性。
J Ethnopharmacol. 2003 Dec;89(2-3):291-4. doi: 10.1016/j.jep.2003.09.010.