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石鳖属 Acanthopleura granulata 的铁响应基因组。

The Iron-Responsive Genome of the Chiton Acanthopleura granulata.

机构信息

Department of Biological Sciences, The University of Alabama, Tuscaloosa, Alabama.

Department of Biological Sciences, University of South Carolina, Columbia, South Carolina.

出版信息

Genome Biol Evol. 2021 Jan 7;13(1). doi: 10.1093/gbe/evaa263.

Abstract

Molluscs biomineralize structures that vary in composition, form, and function, prompting questions about the genetic mechanisms responsible for their production and the evolution of these mechanisms. Chitons (Mollusca, Polyplacophora) are a promising system for studies of biomineralization because they build a range of calcified structures including shell plates and spine- or scale-like sclerites. Chitons also harden the calcified teeth of their rasp-like radula with a coat of iron (as magnetite). Here we present the genome of the West Indian fuzzy chiton Acanthopleura granulata, the first from any aculiferan mollusc. The A. granulata genome contains homologs of many genes associated with biomineralization in conchiferan molluscs. We expected chitons to lack genes previously identified from pathways conchiferans use to make biominerals like calcite and nacre because chitons do not use these materials in their shells. Surprisingly, the A. granulata genome has homologs of many of these genes, suggesting that the ancestral mollusc may have had a more diverse biomineralization toolkit than expected. The A. granulata genome has features that may be specialized for iron biomineralization, including a higher proportion of genes regulated directly by iron than other molluscs. A. granulata also produces two isoforms of soma-like ferritin: one is regulated by iron and similar in sequence to the soma-like ferritins of other molluscs, and the other is constitutively translated and is not found in other molluscs. The A. granulata genome is a resource for future studies of molluscan evolution and biomineralization.

摘要

软体动物生物矿化的结构在组成、形态和功能上都有差异,这引发了人们对负责其产生的遗传机制以及这些机制的进化的问题。石鳖(软体动物,多板纲)是生物矿化研究的一个很有前途的系统,因为它们构建了一系列钙化结构,包括壳板和刺或鳞片状的骨板。石鳖还用一层铁(如磁铁矿)硬化其锉刀状齿舌的钙化牙齿。在这里,我们展示了西印度毛石鳖 Acanthopleura granulata 的基因组,这是第一个来自任何有棘皮类软体动物的基因组。A. granulata 基因组包含了许多与海螺类软体动物生物矿化相关的基因的同源物。我们预计石鳖会缺乏以前从海螺类动物用于制造生物矿物(如方解石和珍珠层)的途径中鉴定出的基因,因为石鳖在其壳中不使用这些材料。令人惊讶的是,A. granulata 基因组拥有许多这些基因的同源物,这表明祖先软体动物可能拥有比预期更多样化的生物矿化工具包。A. granulata 基因组具有可能专门用于铁生物矿化的特征,包括受铁直接调节的基因比例高于其他软体动物。A. granulata 还产生两种类似体细胞的铁蛋白同工型:一种受铁调节,与其他软体动物的体细胞铁蛋白序列相似,另一种是组成性翻译的,在其他软体动物中没有发现。A. granulata 基因组是未来软体动物进化和生物矿化研究的资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/fb98/7850002/1635bd685044/evaa263f1.jpg

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