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鉴定一个免疫相关的六个长非编码 RNA 特征作为肺腺癌的新型预后生物标志物。

Identification of an immune-related six-long noncoding RNA signature as a novel prognosis biomarker for adenocarcinoma of lung.

机构信息

Department of Thoracic Oncology, State Key Laboratory of Oncology in South China, Collaborative Innovation Center for Cancer Medicine, Sun Yat-sen University Cancer Center, Guangzhou 510060, People's Republic of China.

Department of Endocrinology and Metabology, Shandong Provincial Qianfoshan Hospital, Cheeloo College of Medicine, Shandong University, Jinan 250014, People's Republic of China.

出版信息

Biosci Rep. 2021 Jan 29;41(1). doi: 10.1042/BSR20202444.

Abstract

BACKGROUND

Lung adenocarcinoma (LUAD) is a heterogeneous disease with high mortality. Close attention has been paid to immunotherapy in LUAD treatment. However, immunotherapy has produced different therapeutic effects because of immune heterogeneity. Long noncoding RNAs (lncRNAs) are survival prognostic indicators with functions in the immune process. The present study was designed to examine the predictive power of immune-related lncRNAs in LUAD prognosis and investigated potential molecular mechanisms.

METHODS

Transcriptome profiling and LUAD sample clinical information were retrieved from online database. The immune-related lncRNAs signature was identified by Cox regression. Survival analysis was used to verify the validity of the prognosis model. Then, possible biological functions were predicted and the abundance of infiltrating immune cells in LUAD samples were further analyzed.

RESULTS

An immune-associated lncRNAs signature was established by combining six lncRNAs. Patients with LUAD were stratified into high- and low-risk groups using the six lncRNAs signature. Patients in different risk levels had significantly different prognoses (P<0.001), and the immune-associated lncRNAs signature was identified as an independent prognostic factor for LUAD. The functions of the lncRNA signature were confirmed as ubiquitin mediated proteolysis and signal sequence binding. The lncRNA signature negatively correlates with B-cell immune infiltration.

CONCLUSION

A reliable immune-related lncRNAs prognosis model for LUAD was identified. lncRNAs played a vital role in the tumor immune process and were associated with the LUAD prognosis. Research of lncRNAs in B-cell immune infiltration could provide new insight into the immunotherapy of LUAD.

摘要

背景

肺腺癌(LUAD)是一种异质性疾病,死亡率高。免疫疗法在 LUAD 治疗中受到密切关注。然而,由于免疫异质性,免疫疗法产生了不同的治疗效果。长链非编码 RNA(lncRNA)是具有免疫过程功能的生存预后指标。本研究旨在探讨免疫相关 lncRNA 在 LUAD 预后中的预测能力,并研究其潜在的分子机制。

方法

从在线数据库中检索转录组谱和 LUAD 样本临床信息。通过 Cox 回归鉴定免疫相关 lncRNA 特征。生存分析用于验证预后模型的有效性。然后,预测可能的生物学功能,并进一步分析 LUAD 样本中浸润免疫细胞的丰度。

结果

通过结合 6 个 lncRNA 建立了一个免疫相关的 lncRNA 特征。利用该 6 个 lncRNA 特征,将 LUAD 患者分为高风险和低风险组。不同风险水平的患者预后有显著差异(P<0.001),免疫相关 lncRNA 特征被确定为 LUAD 的独立预后因素。lncRNA 特征的功能被确认为泛素介导的蛋白水解和信号序列结合。lncRNA 特征与 B 细胞免疫浸润呈负相关。

结论

鉴定了一个可靠的 LUAD 免疫相关 lncRNA 预后模型。lncRNA 在肿瘤免疫过程中发挥着重要作用,与 LUAD 的预后相关。对 B 细胞免疫浸润的 lncRNA 研究可为 LUAD 的免疫治疗提供新的见解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/051b/7791552/50b1439a956a/bsr-41-bsr20202444-g1.jpg

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