Duan Yitao, Gao Huihui, Zheng Liyang, Liu Shuangqing, Cao Yang, Zhu Siyuan, Wu Zhenzhe, Ren Hongqiang, Mao Daqing, Luo Yi
College of Environmental Science and Engineering, Ministry of Education Key Laboratory of Pollution Processes and Environmental Criteria, Nankai University, Tianjin, China.
School of Medicine, Nankai University, Tianjin, China.
Front Microbiol. 2020 Nov 25;11:598305. doi: 10.3389/fmicb.2020.598305. eCollection 2020.
Extraintestinal pathogenic (ExPEC) can cause many human extraintestinal infections. Resistance and virulence of ExPEC are inextricably linked to its phylogenetic background. However, studies on type-specific distribution of resistance and virulence and the connection between resistance/virulence and molecular typing are lacking. Here, 411 ExPEC strains were collected and characterized using antimicrobial susceptibility testing and molecular typing. Among these, 74 representative strains were selected for whole genome sequencing and the killing assay. CH40-30-ST131, CH37-27-ST405, CH40-41-ST131, and CH13-5-ST12 isolates had high resistance rates to all antimicrobials tested. played a significant role in the β-lactam resistance of ExPEC isolates. CH14-64-ST1193, CH40-30-ST131, and CH35-27-ST69 isolates were highly virulent in the model. Virulence factors (VFs) involved in adherence (, , , and ), autotransporter (), invasion (, ), iron uptake (except for ), or toxin () might be responsible for pathogenicity . Specific antibiotic resistance genes (ARGs) or VFs were prevalent in specific types of strains, including , , , , , , and aerobactin genes in CH14-64-ST1193 isolates; , , , , , , , , , , and in CH40-30-ST131 isolates; in CH35-27-ST69 and CH13-5-ST12 isolates. Type distribution also differed by VF score. CH37-27-ST405 and CH26-5-ST38 isolates carried more ARGs and VFs indicating that they had a high resistance and virulence potential. This study demonstrates the type-specific distribution of resistance and virulence thus providing a basis for further research, prevention and treatment of ExPEC infections.
肠外致病性大肠杆菌(ExPEC)可引起多种人类肠外感染。ExPEC的耐药性和毒力与其系统发育背景密切相关。然而,关于耐药性和毒力的型特异性分布以及耐药性/毒力与分子分型之间的联系的研究尚缺。在此,收集了411株ExPEC菌株,并通过药敏试验和分子分型进行了鉴定。其中,挑选了74株代表性菌株进行全基因组测序和杀伤试验。CH40 - 30 - ST131、CH37 - 27 - ST405、CH40 - 41 - ST131和CH13 - 5 - ST12分离株对所有测试抗菌药物的耐药率都很高。 在ExPEC分离株的β-内酰胺耐药性中起重要作用。CH14 - 64 - ST1193、CH40 - 30 - ST131和CH35 - 27 - ST69分离株在 模型中具有高毒力。参与黏附( 、 、 和 )、自转运蛋白( )、侵袭( 、 )、铁摄取(除 外)或毒素( )的毒力因子(VFs)可能是致病性的原因 。特定的抗生素耐药基因(ARGs)或VFs在特定类型的菌株中普遍存在,包括CH14 - 64 - ST1193分离株中的 、 、 、 、 、 和气杆菌素基因;CH40 - 30 - ST131分离株中的 、 、 、 、 、 、 、 、 、 和 ;CH35 - 27 - ST69和CH13 - 5 - ST12分离株中的 。型分布也因VF评分而异。CH37 - 27 - ST405和CH26 - 5 - ST38分离株携带更多的ARGs和VFs,表明它们具有高耐药性和毒力潜力。本研究证明了耐药性和毒力的型特异性分布,从而为ExPEC感染的进一步研究、预防和治疗提供了依据。