• 文献检索
  • 文档翻译
  • 深度研究
  • 学术资讯
  • Suppr Zotero 插件Zotero 插件
  • 邀请有礼
  • 套餐&价格
  • 历史记录
应用&插件
Suppr Zotero 插件Zotero 插件浏览器插件Mac 客户端Windows 客户端微信小程序
定价
高级版会员购买积分包购买API积分包
服务
文献检索文档翻译深度研究API 文档MCP 服务
关于我们
关于 Suppr公司介绍联系我们用户协议隐私条款
关注我们

Suppr 超能文献

核心技术专利:CN118964589B侵权必究
粤ICP备2023148730 号-1Suppr @ 2026

文献检索

告别复杂PubMed语法,用中文像聊天一样搜索,搜遍4000万医学文献。AI智能推荐,让科研检索更轻松。

立即免费搜索

文件翻译

保留排版,准确专业,支持PDF/Word/PPT等文件格式,支持 12+语言互译。

免费翻译文档

深度研究

AI帮你快速写综述,25分钟生成高质量综述,智能提取关键信息,辅助科研写作。

立即免费体验

恒河艾氏鲇(鲇形目:艾氏鲇科)线粒体全基因组特征分析

Characterization of the complete mitochondrial genome of Gangetic ailia, (Siluriformes: Ailiidae).

作者信息

Alam Md Jobaidul, Andriyono Sapto, Lee Soo Rin, Hossain Mostafa A R, Eunus A T M, Hassan Md Tawheed, Kim Hyun-Woo

机构信息

Interdisciplinary Program of Biomedical, Department Mechanical and Electrical Engineering, Pukyong National University, Busan, Republic of Korea.

Fisheries and Marine Faculty, Universitas Airlangga, Surabaya, Indonesia.

出版信息

Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2258-2259. doi: 10.1080/23802359.2019.1627942.

DOI:10.1080/23802359.2019.1627942
PMID:33365500
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7687414/
Abstract

The first complete mitochondrial genome sequence of from Bangladesh was determined by the bioinformatic assembly of the next generation sequencing (NGS) reads. The constructed circular mitogenome for was 16,565 bp in length which harbored the canonical 13 protein-coding genes, 22 tRNAs, 2 rRNAs. Two non-coding regions, control region, (927 bp), and origin of light strand replication, O (30 bp) were also well conserved in the mitogenome. Among the currently reported mitochondrial genomes in the order Siluriformes, was most closely related to (AB919123) with 85.63% sequence identity.

摘要

通过对下一代测序(NGS)读数进行生物信息学组装,确定了来自孟加拉国的首个完整线粒体基因组序列。构建的该圆形有丝分裂基因组长度为16,565 bp,包含13个标准蛋白质编码基因、22个tRNA、2个rRNA。两个非编码区域,控制区(927 bp)和轻链复制起点O(30 bp)在有丝分裂基因组中也得到了很好的保守。在目前已报道的鲇形目线粒体基因组中,该物种与(AB919123)关系最为密切,序列同一性为85.63%。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c640/7687414/4c8bf506172d/TMDN_A_1627942_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c640/7687414/4c8bf506172d/TMDN_A_1627942_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c640/7687414/4c8bf506172d/TMDN_A_1627942_F0001_B.jpg

相似文献

1
Characterization of the complete mitochondrial genome of Gangetic ailia, (Siluriformes: Ailiidae).恒河艾氏鲇(鲇形目:艾氏鲇科)线粒体全基因组特征分析
Mitochondrial DNA B Resour. 2019 Jul 11;4(2):2258-2259. doi: 10.1080/23802359.2019.1627942.
2
Characterization of the complete mitochondrial genome of collected from Nakdong River, South Korea.
Mitochondrial DNA B Resour. 2019 Nov 8;4(2):3908-3909. doi: 10.1080/23802359.2019.1687362.
3
Characterization of the complete mitochondrial genome of in Korean river.韩国河流中[具体物种名称缺失]线粒体全基因组的特征分析
Mitochondrial DNA B Resour. 2019 Nov 8;4(2):3886-3887. doi: 10.1080/23802359.2019.1687347.
4
The first determination and analysis of the complete mitochondrial genome of (Siluriformes: Loricariidae).(鲇形目:甲鲇科)线粒体全基因组的首次测定与分析
Mitochondrial DNA B Resour. 2021 May 4;6(5):1583-1585. doi: 10.1080/23802359.2020.1866446.
5
Comparative study of the olfactory organs of two hill-stream fishes--Labeo boggut (Sykes) and Ailia coila (Ham.).
Funct Dev Morphol. 1991;1(1):77-80.
6
The complete mitochondrial genome sequence of Hemibagrus sp. (Siluriformes: Bagridae), molecular data for species identification.半鲿属物种(鲇形目:鲿科)的完整线粒体基因组序列,用于物种鉴定的分子数据。
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 May;27(3):1914-5. doi: 10.3109/19401736.2014.971284. Epub 2014 Oct 16.
7
Complete mitochondrial genome of (Viperidae: Crotalinae) from Korea.来自韩国的(蝰蛇科:蝮亚科)线粒体全基因组。
Mitochondrial DNA B Resour. 2021 Feb 17;6(2):645-647. doi: 10.1080/23802359.2021.1878957.
8
Sequencing and annotation of the complete mitochondrial genome of a threatened labeonine fish, Cirrhinus reba.濒危野鲮亚科鱼类瑞氏卷口鱼线粒体全基因组的测序与注释
Genomics Inform. 2020 Sep;18(3):e32. doi: 10.5808/GI.2020.18.3.e32. Epub 2020 Sep 10.
9
The complete mitogenome of Bagrid catfish (Siluriformes: Claroteidae).鲿科鲶鱼(鲇形目:鲿科)的完整线粒体基因组
Mitochondrial DNA B Resour. 2018 Oct 25;3(2):1239-1240. doi: 10.1080/23802359.2018.1532341.
10
Complete mitochondrial genome of catfish Eutropiichthys vacha (Hamilton, 1822).鲶鱼(Eutropiichthys vacha,汉密尔顿,1822年)的完整线粒体基因组
Mitochondrial DNA A DNA Mapp Seq Anal. 2016 Sep;27(5):3224-5. doi: 10.3109/19401736.2015.1007357. Epub 2015 Jan 29.

引用本文的文献

1
Characterization of the Complete Mitochondrial Genome of the Spotted Catfish (Thunberg, 1792) and Its Phylogenetic Implications.斑点叉尾鮰(Thunberg,1792)的线粒体基因组全序列特征及其系统发育意义。
Genes (Basel). 2022 Nov 16;13(11):2128. doi: 10.3390/genes13112128.

本文引用的文献

1
MEGA7: Molecular Evolutionary Genetics Analysis Version 7.0 for Bigger Datasets.MEGA7:适用于更大数据集的分子进化遗传学分析版本7.0
Mol Biol Evol. 2016 Jul;33(7):1870-4. doi: 10.1093/molbev/msw054. Epub 2016 Mar 22.
2
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
3
ARWEN: a program to detect tRNA genes in metazoan mitochondrial nucleotide sequences.
ARWEN:一个用于检测后生动物线粒体核苷酸序列中tRNA基因的程序。
Bioinformatics. 2008 Jan 15;24(2):172-5. doi: 10.1093/bioinformatics/btm573. Epub 2007 Nov 22.