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张氏木荷(山茶科)的完整叶绿体基因组序列

The complete chloroplast genome sequence of F. C. Zhang (Theaceae).

作者信息

Hao Wan-Jun, Ma Jian-Qiang, Ma Chunlei, Jin Jiqiang, Chen Liang

机构信息

Key Laboratory of Tea Biology and Resources Utilization, Ministry of Agriculture and Rural Affairs, Tea Research Institute of the Chinese Academy of Agricultural Sciences, Hangzhou, Zhejiang, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 4;4(2):3344-3345. doi: 10.1080/23802359.2019.1673247.

DOI:10.1080/23802359.2019.1673247
PMID:33365985
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707387/
Abstract

To understand genetic background and phylogenetic position of , we determined its complete chloroplast genome sequence which is 157,026 bp in length with overall GC content of 36.7%. It has four sub regions: a large single-copy (LSC) region (86,669 bp) and a small single-copy (SSC) region (18,253 bp) are separated by two inverted repeat (IR) regions (26,052 bp each). A total of 129 genes were annotated, containing 86 protein-coding genes, 35 tRNA genes, and 8 rRNA genes. Phylogenetic trees showed clustered with and and separated from and its two varieties, var. and var.

摘要

为了解[具体名称]的遗传背景和系统发育位置,我们测定了其完整的叶绿体基因组序列,该序列长度为157,026 bp,总体GC含量为36.7%。它有四个亚区:一个大单拷贝(LSC)区(86,669 bp)和一个小单拷贝(SSC)区(18,253 bp)被两个反向重复(IR)区(各26,052 bp)隔开。总共注释了129个基因,包括86个蛋白质编码基因、35个tRNA基因和8个rRNA基因。系统发育树显示[具体名称]与[相关名称1]和[相关名称2]聚类在一起,并与[另一名称]及其两个变种[变种名称1]和[变种名称2]分开。

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Mitochondrial DNA B Resour. 2018 Apr 1;3(1):426-427. doi: 10.1080/23802359.2018.1457996.
3
Genome skimming herbarium specimens for DNA barcoding and phylogenomics.
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PLoS One. 2024 Dec 5;19(12):e0314595. doi: 10.1371/journal.pone.0314595. eCollection 2024.
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