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日本山茶(L.)的完整叶绿体基因组序列

The complete chloroplast genome sequence of the Japanese Camellia ( L.).

作者信息

Kim Seon-Hee, Cho Chung Hyun, Yang Misuk, Kim Seung-Chul

机构信息

Department of Biological Sciences, Sungkyunkwan University, Suwon, Gyeonggi-do, Republic of Korea.

AmorePacific Corporation, R&D Center, Yongin-si, Gyeonggi-do, Republic of Korea.

出版信息

Mitochondrial DNA B Resour. 2017 Aug 30;2(2):583-584. doi: 10.1080/23802359.2017.1372719.

Abstract

The complete chloroplast genome sequence of valuable ornamental tree, L. (Theaceae), was determined. The genome size was 156,971 bp in length, containing a pair of 25,798 bp inverted repeat (IR) regions, which were separated by small and large single copy regions (SSC and LSC) of 18,394 and 86,673 bp, respectively. The cp genome contained 134 genes, including 91 coding genes, six rRNA genes, and 37 tRNA genes. The overall GC content of the chloroplast genome was 37.3%. Phylogenetic analysis revealed the position of being sister to the clade containing and (subgenus ).

摘要

测定了珍贵观赏树种木荷(山茶科)完整的叶绿体基因组序列。基因组长度为156,971 bp,包含一对25,798 bp的反向重复(IR)区域,它们分别被18,394 bp的小单拷贝区域(SSC)和86,673 bp的大单拷贝区域(LSC)隔开。叶绿体基因组包含134个基因,包括91个编码基因、6个rRNA基因和37个tRNA基因。叶绿体基因组的总体GC含量为37.3%。系统发育分析表明,木荷的位置是包含厚皮香属和猪血木属(红皮糙果茶亚属)的分支的姐妹分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4292/7800054/ea4b281df051/TMDN_A_1372719_F0001_B.jpg

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