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樱桃植物(蔷薇科)的完整质体基因组及其系统发育意义。

The complete plastid genome of cherry plants (Rosaceae) and its phylogenetic implication.

作者信息

Li Meng, Song Yan-Feng, Zhu Shu-Xia, Zhu Hong, Yi Xian-Gui, Chen Zhang-Chi, Li Ming-Zhi, Wang Xian-Rong

机构信息

Co-Innovation Center for Sustainable Forestry in Southern China, Nanjing Forestry University, Nanjing, Jiangsu, China.

Cherry Research Institute, College of Biology and the Environment, Nanjing Forestry University, Nanjing, Jiangsu, China.

出版信息

Mitochondrial DNA B Resour. 2019 Oct 18;4(2):3640-3641. doi: 10.1080/23802359.2019.1677519.

Abstract

is an endemic cherry species with ornamental value, spread in eastern China (Anhui, Jiangxi, Zhejiang provinces). Little information is available regarding its genomic, with limited phylogenetic relationship study performed on until now. The plastid genome was 158,024 bp in length consisting of four regions: large single-copy region (85,953 bp), small single-copy region (19,113 bp), and a pair of inverted repeat regions (26,469 bp each). The plastid genome contained a total of 129 genes, including 84 coding genes, 8 rRNA genes, and 37 tRNA genes. Phylogenetic analysis for 20 reported genomes within the showed three main clades of with strong supports.

摘要

是一种具有观赏价值的本土樱桃物种,分布于中国东部(安徽、江西、浙江三省)。关于其基因组的信息很少,到目前为止对其进行的系统发育关系研究有限。质体基因组长度为158,024 bp,由四个区域组成:大单拷贝区域(85,953 bp)、小单拷贝区域(19,113 bp)和一对反向重复区域(各26,469 bp)。质体基因组总共包含129个基因,包括84个编码基因、8个rRNA基因和37个tRNA基因。对该属内20个已报道基因组的系统发育分析显示该属有三个主要分支,支持度很强。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ffd1/7707402/2c0a57f8e93a/TMDN_A_1677519_F0001_B.jpg

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