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(兰科,指甲兰亚族)的完整质体基因组。

The complete plastid genome of (Orchidaceae, Aeridinae).

作者信息

Liu Ding-Kun, Tu Xiong-De, Zhang Sai, Li Ming-He

机构信息

Key Laboratory of National Forestry and Grassland Administration for Orchid Conservation and Utilization at College of Landscape Architecture, Fujian Agriculture and Forestry University, Fuzhou, China.

Fujian Colleges and Universities Engineering Research Institute of Conservation and Utilization of Natural Bioresources at College of Forestry, Fujian Agriculture and Forestry University, Fuzhou, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 12;4(2):3985-3986. doi: 10.1080/23802359.2019.1688702.

DOI:10.1080/23802359.2019.1688702
PMID:33366282
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707680/
Abstract

The complete plastid genome of was determined and analyzed in this work. The plastome was 146,681 bp in length with 83,920 bp of the large single-copy (LSC) region, 11,751 bp of the small single-copy (SSC) region and 25,505 bp of the inverted repeat (IR) regions. The genome contained 120 genes, 74 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. Phylogenetic analysis suggested is sister to plus .

摘要

在本研究中测定并分析了[物种名称]的完整质体基因组。该质体基因组长度为146,681 bp,其中大单拷贝(LSC)区域为83,920 bp,小单拷贝(SSC)区域为11,751 bp,反向重复(IR)区域为25,505 bp。该基因组包含120个基因,74个蛋白质编码基因,38个tRNA基因和8个rRNA基因。系统发育分析表明[物种名称]是[另一物种名称]与[又一物种名称]组合的姐妹分支。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce4a/7707680/5a7418a6089f/TMDN_A_1688702_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce4a/7707680/5a7418a6089f/TMDN_A_1688702_F0001_B.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/ce4a/7707680/5a7418a6089f/TMDN_A_1688702_F0001_B.jpg

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本文引用的文献

1
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Bioinformatics. 2015 Oct 15;31(20):3350-2. doi: 10.1093/bioinformatics/btv383. Epub 2015 Jun 22.
2
RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
3
Single-cell RNA-Seq profiling of human preimplantation embryos and embryonic stem cells.
The complete chloroplast genome sequence of (Orchidaceae, Aeridinae).
(兰科,指甲兰亚族)的完整叶绿体基因组序列。
Mitochondrial DNA B Resour. 2021 Sep 24;6(10):3036-3037. doi: 10.1080/23802359.2021.1959459. eCollection 2021.
4
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Mitochondrial DNA B Resour. 2021 Mar 26;6(3):1245-1246. doi: 10.1080/23802359.2021.1906171.
5
The complete plastid genome of (Orchidaceae, Vandeae).(兰科,万代兰族)的完整质体基因组。
Mitochondrial DNA B Resour. 2020 Jan 21;5(1):390-391. doi: 10.1080/23802359.2019.1704185.
6
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Mitochondrial DNA B Resour. 2020 Jan 21;5(1):384-385. doi: 10.1080/23802359.2019.1703594.
单细胞 RNA 测序分析人类着床前胚胎和胚胎干细胞。
Nat Struct Mol Biol. 2013 Sep;20(9):1131-9. doi: 10.1038/nsmb.2660. Epub 2013 Aug 11.
4
MAFFT multiple sequence alignment software version 7: improvements in performance and usability.MAFFT 多序列比对软件版本 7:性能和易用性的改进。
Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.
5
Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data.Geneious Basic:一个集成和可扩展的桌面软件平台,用于组织和分析序列数据。
Bioinformatics. 2012 Jun 15;28(12):1647-9. doi: 10.1093/bioinformatics/bts199. Epub 2012 Apr 27.
6
SPAdes: a new genome assembly algorithm and its applications to single-cell sequencing.SPAdes:一种新的基因组组装算法及其在单细胞测序中的应用
J Comput Biol. 2012 May;19(5):455-77. doi: 10.1089/cmb.2012.0021. Epub 2012 Apr 16.