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木犀科(Oleaceae)植物的叶绿体全基因组序列:基因组结构与基因组资源

Complete chloroplast genome sequence of (Oleaceae): genome structure and genomic resources.

作者信息

Wang Lei, Wang Ning, Sun Jiahui

机构信息

Foresty College, Henan University of Science and Technology, Luoyang, China.

State Key Laboratory Breeding Base of Dao-di Herbs, National Resource Center for Chinese Materia Medica, China Academy of Chinese Medical Sciences, Beijing, China.

出版信息

Mitochondrial DNA B Resour. 2019 Nov 13;4(2):4047-4048. doi: 10.1080/23802359.2019.1687349.

DOI:10.1080/23802359.2019.1687349
PMID:33366311
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7707733/
Abstract

is popular as landscape plants used as hedges in gardens. In this study, we sequenced the complete chloroplast genome of based on next-generation sequencing and used the data to assess genomic resources. The chloroplast genome of is 163,575 bp in length consisting of large and small single-copy regions of length 88,072 and 11,493 bp, separated by two IR regions of 32,005 bp. assembly and annotation showed the presence of 115 unique genes with 81 protein-coding genes, 30 tRNA genes, and four rRNA genes. A total of 62 perfect chloroplast simple sequence repeats were analyzed in the . A maximum-likelihood phylogenomic analysis showed that was sister to

摘要

作为园林中用作树篱的景观植物很受欢迎。在本研究中,我们基于下一代测序对[植物名称]的完整叶绿体基因组进行了测序,并利用这些数据评估基因组资源。[植物名称]的叶绿体基因组长度为163,575 bp,由长度分别为88,072和11,493 bp的大单拷贝和小单拷贝区域组成,中间由两个32,005 bp的反向重复(IR)区域隔开。组装和注释显示存在115个独特基因,包括81个蛋白质编码基因、30个tRNA基因和4个rRNA基因。在[植物名称]中总共分析了62个完美的叶绿体简单序列重复。最大似然系统发育基因组分析表明,[植物名称]与[另一植物名称或类群]是姐妹关系

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Comparative analysis of the complete chloroplast genome sequences in psammophytic species (Amaranthaceae).沙生植物(苋科)叶绿体全基因组序列的比较分析
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