湿地大型植物（香蒲科）叶绿体全基因组序列的特征分析
Characterization of the complete chloroplast genome sequence of wetland macrophyte (Typhaceae).
作者信息
Liu Zhen-Dian, Zhou Xiong-Li, Ma Hai-Ying, Tian Yu-Qiang, Shen Shi-Kang
机构信息
School of Life Sciences, Yunnan University, Kunming, Yunnan, China.
School of Ecology and Environmental Sciences & Yunnan Key Laboratory for Plateau Mountain Ecology and Restoration of Degraded Environments, Yunnan University, Kunming, Yunnan, China.
出版信息
Mitochondrial DNA B Resour. 2019 Dec 12;5(1):136-137. doi: 10.1080/23802359.2019.1698348.
is an important wetland macrophyte native to the eastern parts of Asia and Oceania. Herein, the complete chloroplast genome of this species was assembled and characterized using whole-genome next-generation sequencing. The complete chloroplast genome showed a circular genome of 160,969 bp size with 36.6% GC content. The genome is of typical structure and contains a pair of inverted repeat (IR) regions with 26,691 bp, separated by one large single-copy (LSC) with 89,118 bp, and one small single-copy (SSC) regions with 18,469 bp. The genome contained 132 genes, including 86 protein-coding genes, 38 tRNA genes, and 8 rRNA genes. A phylogenetic tree reconstructed based on 15 chloroplast genomes reveals that is most related to
是一种原产于亚洲东部和大洋洲的重要湿地大型植物。在此，利用全基因组二代测序技术组装并鉴定了该物种的完整叶绿体基因组。完整的叶绿体基因组呈环状，大小为160,969 bp，GC含量为36.6%。该基因组结构典型，包含一对26,691 bp的反向重复（IR）区域，由一个89,118 bp的大单拷贝（LSC）区域和一个18,469 bp的小单拷贝（SSC）区域隔开。该基因组包含132个基因，包括86个蛋白质编码基因、38个tRNA基因和8个rRNA基因。基于15个叶绿体基因组重建的系统发育树表明， 与 关系最为密切。
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