Chen Lu-Xi, Brown Kevin R, Yi Xian-Gui, Sun Zhong-Shuai
Zhejiang Provincial Key Laboratory of Plant Evolutionary Ecology and Conservation, Taizhou University, Taizhou, China.
KR Brown and Associates, Victoria, Canada.
Mitochondrial DNA B Resour. 2019 Oct 9;4(2):3402-3403. doi: 10.1080/23802359.2019.1674212.
is a species of Prunus native to western North America.We determined the first complete chloroplast genome of using genome skimming approach. The cp genome was 157,458 bp long, with a large single-copy region (LSC) of 85,567 bp and a small single-copy region (SSC) of 19,121 bp separated by a pair of inverted repeats (IRs) of 26,385 bp. It encodes 129 genes, including 84 protein-coding genes, 37 tRNA genes, and 8 ribosomal RNA genes. We also reconstructed the phylogeny of using maximum likelihood (ML) method, including our data and previously reported cp genomes of related taxa. The phylogenetic analysis indicated that is closely related with var. and .
是一种原产于北美西部的李属物种。我们使用基因组浅层测序方法确定了 的首个完整叶绿体基因组。叶绿体基因组长度为157,458 bp,有一个85,567 bp的大单拷贝区域(LSC)和一个19,121 bp的小单拷贝区域(SSC),由一对26,385 bp的反向重复序列(IR)隔开。它编码129个基因,包括84个蛋白质编码基因、37个tRNA基因和8个核糖体RNA基因。我们还使用最大似然法(ML)重建了 的系统发育,包括我们的数据和先前报道的相关类群的叶绿体基因组。系统发育分析表明, 与 变种 和 密切相关。