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中国特有的濒危物种珙桐(蓝果树科)完整叶绿体基因组的特征分析

Characterization of the complete chloroplast genome of Baill. (Nysssaceae), an endangered species endemic to China.

作者信息

Qi Zhuo, Jiang Zhenzhong, Jiao Peng, Qu Jing, Liu Siyan, Yao Dan, Wang Piwu, Guan Shuyan, Ma Yiyong

机构信息

College of Life Sciences, Jilin Agricultural University, Changchun, China.

出版信息

Mitochondrial DNA B Resour. 2019 Dec 12;5(1):216-217. doi: 10.1080/23802359.2019.1699468.

Abstract

Baill. is a kind of tertiary paleotropical plant floristic relic species unique to China. This rare plant is disappearing due to poor adaptability and serious poaching. We first assembled the complete chloroplast (cp) genome of Baill. by Illumina paired-end reads data. The whole genome was 169,085 bp, consisting of a pair of inverted repeats of 169,379 bp, large single copy region and a small single copy region (96,712 and 67,667 bp in length, respectively). The cp genome contained 90 genes, including 64 protein-coding genes, 22 trRNA genes and 4 rRNA genes. The overall GC content of the whole genome was 38.04%. A neighbor-joining phylogenetic analysis demonstrated a close relationship between Baill. and

摘要

伯乐树是中国特有的一种第三纪古热带植物区系的残遗物种。这种珍稀植物由于适应性差和偷猎严重而正在消失。我们首先通过Illumina双端读长数据组装了伯乐树完整的叶绿体(cp)基因组。全基因组为169,085 bp,由一对16,937 bp的反向重复序列、一个大单拷贝区域和一个小单拷贝区域(长度分别为96,712和67,667 bp)组成。cp基因组包含90个基因,包括64个蛋白质编码基因、22个tRNA基因和4个rRNA基因。全基因组的总体GC含量为38.04%。邻接法系统发育分析表明伯乐树与……之间关系密切

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/710e/7748617/c36d7d78a5fa/TMDN_A_1699468_F0001_C.jpg

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