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(山茶科)的完整叶绿体基因组。

The complete chloroplast genome of (Theaceae).

作者信息

Liu Shangli, Pei Siyu, Huang Lin, Tang Shaoqing

机构信息

Key Laboratory of Ecology of Rare and Endangered Species and Environmental Protection, Ministry of Education, Guangxi Normal University, Guilin, China.

Guangxi Key Laboratory of Rare and Endangered Animal Ecology, College of Life Science, Guangxi Normal University, Guilin, China.

出版信息

Mitochondrial DNA B Resour. 2020 May 28;5(3):2228-2230. doi: 10.1080/23802359.2020.1768957. eCollection 2020.

DOI:10.1080/23802359.2020.1768957
PMID:33366984
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC7510655/
Abstract

is an endangered species. This species contains two varieties. Here, we report on the chloroplast genomes of var. from Fangcheng (GenBank accession MT157617) and Nanning (MT157618), as well as one sample of . var. (MT157619) from Nanning. The total chloroplast genomes of var. Fangcheng and Nanning samples are 156,596 bp and 157,567 bp in length, respectively. var. (MT157619) genome is 157,407 bp in length. The three samples possess GC contents of 37.3%, 128 genes, comprising 86 protein-coding genes, 34 tRNA genes, and 8 rRNA genes.

摘要

是一种濒危物种。该物种包含两个变种。在此,我们报道了来自防城(GenBank登录号MT157617)和南宁(MT157618)的变种的叶绿体基因组,以及来自南宁的一个变种样本(MT157619)。防城和南宁样本的变种的叶绿体基因组总长度分别为156,596 bp和157,567 bp。变种(MT157619)基因组长度为157,407 bp。这三个样本的GC含量为37.3%,有128个基因,包括86个蛋白质编码基因、34个tRNA基因和8个rRNA基因。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a28f/7510655/c2882c37b799/TMDN_A_1768957_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a28f/7510655/c2882c37b799/TMDN_A_1768957_F0001_C.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a28f/7510655/c2882c37b799/TMDN_A_1768957_F0001_C.jpg

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RAxML version 8: a tool for phylogenetic analysis and post-analysis of large phylogenies.RAxML 版本 8:用于系统发育分析和大型系统发育后分析的工具。
Bioinformatics. 2014 May 1;30(9):1312-3. doi: 10.1093/bioinformatics/btu033. Epub 2014 Jan 21.
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MAFFT multiple sequence alignment software version 7: improvements in performance and usability.
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Mol Biol Evol. 2013 Apr;30(4):772-80. doi: 10.1093/molbev/mst010. Epub 2013 Jan 16.