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绘制圈养和没收的赫曼陆龟的地理起源:保护和法医学分析的遗传工具包。

Mapping the geographic origin of captive and confiscated Hermann's tortoises: A genetic toolkit for conservation and forensic analyses.

机构信息

Dipartimento di Scienze della Vita e Biotecnologie, Università di Ferrara, Via Luigi Borsari 46, 44121, Ferrara, Italy; Department of Crop Genetics, John Innes Centre, Norwich Research Park, NR4 7UH, Norwich, UK.

Dipartimento di Scienze Ecologiche e Biologiche, Università della Tuscia, Largo dell'Università s.n.c., 01100, Viterbo, Italy; Laboratorio Centrale per la Banca Dati Nazionale del DNA, Dipartimento dell'Amministrazione Penitenziaria, Ministero della Giustizia, via del Casale di San Basilio 168, 00156, Roma, Italy.

出版信息

Forensic Sci Int Genet. 2021 Mar;51:102447. doi: 10.1016/j.fsigen.2020.102447. Epub 2020 Dec 25.

Abstract

The illegal trade has been threatening tortoise populations worldwide for decades. Nowadays, however, DNA typing and forensic genetic approaches allow us to investigate the geographic origin of confiscated animals and to relocate them into the wild, providing that suitable molecular tools and reference data are available. Here we assess the suitability of a small panel of microsatellite markers to investigate patterns of illegal translocations and to assist forensic genetic applications in the endangered Mediterranean land tortoise Testudo hermanni hermanni. Specific allelic ladders were created for each locus and tested on several reference samples. We used the microsatellite panel to (i) increase our understanding of the population genetic structure in wild populations with new data from previously unsampled geographic areas (overall 461 wild individuals from 28 sampling sites); (ii) detect the presence of non-native individuals in wild populations; and (iii) identify the most likely geographic area of origin of 458 confiscated individuals hosted in Italian seizure and recovery centers. Our analysis initially identified six major genetic clusters corresponding to different geographic macro-areas along the Mediterranean range. Long-distance migrants among wild populations, due to translocations, were found and removed from the reference database. Assignment tests allowed us to allocate approximately 70 % of confiscated individuals of unknown origin to one of the six Mediterranean macro-areas. Most of the assigned tortoises belonged to the genetic cluster corresponding to the area where the respective captivity center was located. However, we also found evidence of long-distance origins of confiscated individuals, especially in centers along the Adriatic coast and facing the Balkan regions, a well-known source of illegally traded individuals. Our results clearly show that the microsatellite panel and the reference dataset can play a beneficial role in reintroduction and repatriation projects when confiscated individuals need to be re-assigned to their respective macro-area of origin before release, and can assist future forensic genetic applications in detecting the illegal trade and possession of Testudo hermanni individuals.

摘要

非法贸易数十年来一直威胁着全球的龟类种群。然而,如今 DNA 分型和法医遗传学方法使我们能够调查被没收动物的地理来源,并将其重新放归野外,只要有合适的分子工具和参考数据。在这里,我们评估了一小组微卫星标记物的适用性,以调查非法转移的模式,并协助濒危地中海陆龟 Testudo hermanni hermanni 的法医遗传应用。为每个位点创建了特定的等位基因梯,并在几个参考样本上进行了测试。我们使用微卫星面板:(i)利用来自以前未采样地理区域的新数据,增加对野生种群遗传结构的了解(来自 28 个采样点的总共 461 只野生个体);(ii)在野生种群中检测非本地个体;(iii)确定 458 只被没收个体在意大利扣押和恢复中心最可能的原籍地理区域。我们的分析最初确定了六个主要的遗传聚类,对应于地中海范围内不同的地理大区。在野生种群中,由于转移而发现了长距离的移徙者,并从参考数据库中删除了这些移徙者。分配测试允许我们将大约 70%的原籍不明的没收个体分配到六个地中海大区之一。大多数被分配的龟类属于与各自圈养中心所在地相对应的遗传聚类。然而,我们也发现了没收个体来自远距离起源的证据,尤其是在亚得里亚海沿岸和面对巴尔干地区的中心,这些地区是非法交易个体的已知来源。我们的结果清楚地表明,微卫星面板和参考数据集在重新引入和遣返项目中可以发挥有益的作用,特别是在需要将没收的个体重新分配到其各自的原籍大区以便释放时,并且可以协助未来的法医遗传学应用,以检测 Testudo hermanni 个体的非法贸易和拥有情况。

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